RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 HELZP42694 1942 aaKnown RBP16.18■□□□□ 0.18
PRPF38B-202ENST00000370022 TMEM191CA6NGB0 347 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 IRF1P10914 325 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 SRFP11831 508 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 MAGEA1P43355 309 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 RPL7AP62424 266 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 PFKPQ01813 784 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 GRM2Q14416 872 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TRNP1Q6NT89 227 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 RAD9BQ6WBX8 426 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TTC16Q8NEE8 873 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 AZIN2Q96A70 460 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TRPV5Q9NQA5 729 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC2A4RGQ9NR83 387 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 UVRAGQ9P2Y5 699 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 LCMT1Q9UIC8 334 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 C5orf42Q9H799 3197 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 ARHGAP6O43182 974 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 GREM1O60565 184 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 ENDOD1O94919 500 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 GJB6O95452 261 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 APOEP02649 317 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 HMBSP08397 361 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 CORO1AP31146 461 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 GDI1P31150 447 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 CCR1P32246 355 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 RDXP35241 583 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 IFNAR2P48551 515 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 KRT83P78385 493 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 DEUP1Q05D60 604 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 NME3Q13232 169 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 CCDC14Q49A88 953 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 Q6ZNB5 142 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 RHOT2Q8IXI1 618 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 UBALD2Q8IYN6 164 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 DNASE1L2Q92874 299 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 FCRL2Q96LA5 508 aaPredicted RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 NECAB3Q96P71 396 aaPredicted RBP16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TBCBQ99426 244 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 FAM83CQ9BQN1 747 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 CNPY3Q9BT09 278 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 PACSIN1Q9BY11 444 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 BRD9Q9H8M2 597 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC12A6Q9UHW9 1150 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
PRPF38B-202ENST00000370022 TCF20Q9UGU0 1960 aaKnown RBP16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 PITX1P78337 314 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 BRMS1LQ5PSV4 323 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 OTUD1Q5VV17 481 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 ATP2A3Q93084 1043 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 RNF34Q969K3 372 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 NCAPGQ9BPX3 1015 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 NUP85Q9BW27 656 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 CD320Q9NPF0 282 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 STOML2Q9UJZ1 356 aa16.16■□□□□ 0.18
PRPF38B-202ENST00000370022 NFATC1O95644 943 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 KLKB1P03952 638 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 CHKAP35790 457 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 SLC11A2P49281 568 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 CXCR3P49682 368 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 ATP11AP98196 1134 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 ACAP1Q15027 740 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 TCEAL1Q15170 157 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 ACBD5Q5T8D3 534 aaPredicted RBP16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 BBS7Q8IWZ6 715 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 ATP6V0D2Q8N8Y2 350 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 ARHGEF26Q96DR7 871 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 BTN2A3PQ96KV6 586 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 IRX2Q9BZI1 471 aaPredicted RBP16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 WDCPQ9H6R7 721 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 PIGVQ9NUD9 493 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 CTTNBP2NLQ9P2B4 639 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 AGO1Q9UL18 857 aaKnown RBP16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 WNT6Q9Y6F9 365 aa16.15■□□□□ 0.18
PRPF38B-202ENST00000370022 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 KCNU1A8MYU2 1149 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 ARNTLO00327 626 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 TFE3P19532 575 aaPredicted RBP16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 PSMA2P25787 234 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 C15orf59Q2T9L4 293 aaPredicted RBP16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 EML3Q32P44 896 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 DENND1CQ8IV53 801 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 ADGRG2Q8IZP9 1017 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 ZNF564Q8TBZ8 553 aaPredicted RBP16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 CSGALNACT1Q8TDX6 532 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 FAM172AQ8WUF8 416 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 RFFLQ8WZ73 363 aa16.14■□□□□ 0.17
PRPF38B-202ENST00000370022 WBP2Q969T9 261 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms