RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NAT9Q9BTE0 207 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 DDX20Q9UHI6 824 aaKnown RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 VAV3Q9UKW4 847 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 MYO9BQ13459 2157 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 SGPL1O95470 568 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 FAM120BQ96EK7 910 aaKnown RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 ELOVL6Q9H5J4 265 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 C8orf4Q9NR00 106 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 H3BN98 237 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 AP1G2O75843 785 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 TPBGLP0DKB5 382 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 PAICSP22234 425 aaKnown RBP12.77□□□□□ -0.37
HCFC1-202ENST00000369984 ORC1Q13415 861 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 CBFBQ13951 182 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 DGUOKQ16854 277 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 ZNF284Q2VY69 593 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 TCEAL5Q5H9L2 206 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 ZCCHC7Q8N3Z6 543 aaKnown RBP12.77□□□□□ -0.37
HCFC1-202ENST00000369984 MXRA8Q9BRK3 442 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 AGRPO00253 132 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 LBPP18428 481 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 TAF6P49848 677 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 WDR93Q6P2C0 686 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 NECAB2Q7Z6G3 386 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 MAML3Q96JK9 1138 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.37
HCFC1-202ENST00000369984 PHGDHO43175 533 aaKnown RBP12.77□□□□□ -0.37
HCFC1-202ENST00000369984 FBXO42Q6P3S6 717 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 GPAMQ9HCL2 828 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 NEO1Q92859 1461 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 HS6ST1O60243 411 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 LCA5LO95447 670 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 RARGP13631 454 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 PMF1Q6P1K2 205 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 PHF21BQ96EK2 531 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 ENOPH1Q9UHY7 261 aa12.77□□□□□ -0.37
HCFC1-202ENST00000369984 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CNPP09543 421 aaKnown RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 TGM3Q08188 693 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 SLC47A2Q86VL8 602 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ACOX2Q99424 681 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 DCUN1D5Q9BTE7 237 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 AGPAT3Q9NRZ7 376 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 A0A0B4J269 797 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 UBDO15205 165 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 RPA1P27694 616 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 RXRGP48443 463 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 TUBB3Q13509 450 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CCSAPQ6IQ19 270 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ACTRT1Q8TDG2 376 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 KATNA1O75449 491 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CCNIQ14094 377 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 SCARF1Q14162 830 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 TTC23Q5W5X9 447 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 PGBD2Q6P3X8 592 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 AFF2P51816 1311 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 TNFRSF21O75509 655 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CSHL1Q14406 222 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 PKN1Q16512 942 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 SLITRK2Q9H156 845 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 PRR12Q9ULL5 1215 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 MYRFQ9Y2G1 1151 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 MYL12BO14950 172 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ZFP1Q6P2D0 407 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ROBO2Q9HCK4 1378 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CYP7B1O75881 506 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 CPA3P15088 417 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ZNF24P17028 368 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
HCFC1-202ENST00000369984 DKK3Q9UBP4 350 aa12.76□□□□□ -0.37
HCFC1-202ENST00000369984 RNF17Q9BXT8 1623 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SCGNO76038 276 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 NDUFB10O96000 172 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 CYP2C8P10632 490 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 CYP11B1P15538 503 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 HALP42357 657 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms