RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 DQX1Q8TE96 717 aaKnown RBP13.19□□□□□ -0.3
EFNA1-201ENST00000368406 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
EFNA1-201ENST00000368406 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TMEM59LQ9UK28 342 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
EFNA1-201ENST00000368406 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 CPQQ9Y646 472 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ARNTLO00327 626 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 GDI1P31150 447 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SSR1P43307 286 aaKnown RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SLC7A9P82251 487 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 PRKCQQ04759 706 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 DEUP1Q05D60 604 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 GRM2Q14416 872 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ARHGAP29Q52LW3 1261 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SLC44A4Q53GD3 710 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SYPL2Q5VXT5 272 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ARCQ7LC44 396 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 YAF2Q8IY57 180 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SIX5Q8N196 739 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SLC35G2Q8TBE7 412 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SHDQ96IW2 340 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SLC22A12Q96S37 553 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 TBCBQ99426 244 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 TFR2Q9UP52 801 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
EFNA1-201ENST00000368406 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 PAXBP1Q9Y5B6 917 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
EFNA1-201ENST00000368406 WDFY4Q6ZS81 3184 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 TCRBV5S1A1TA0A578 114 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 KRBA1A5PL33 1030 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 MYO1FO00160 1098 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 CCP110O43303 1012 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 RNF8O76064 485 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 APOEP02649 317 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 FYNP06241 537 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 GLULP15104 373 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 ZNF143P52747 638 aaPredicted RBP13.17□□□□□ -0.3
EFNA1-201ENST00000368406 TBX4P57082 545 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 STARD6P59095 220 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 COG7P83436 770 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 IFI16Q16666 785 aaKnown RBP13.17□□□□□ -0.3
EFNA1-201ENST00000368406 C15orf59Q2T9L4 293 aaPredicted RBP13.17□□□□□ -0.3
EFNA1-201ENST00000368406 SLC25A52Q3SY17 297 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 FAM172AQ8WUF8 416 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 CNPY3Q9BT09 278 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
EFNA1-201ENST00000368406 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 LCMT1Q9UIC8 334 aa13.17□□□□□ -0.3
EFNA1-201ENST00000368406 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
EFNA1-201ENST00000368406 MACROD2A1Z1Q3 448 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 TMEM191CA6NGB0 347 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 LEFTY2O00292 366 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 KRT86O43790 486 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 F9P00740 461 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 PTPN9P43378 593 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 CLCN5P51795 746 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 MESDQ14696 234 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 MLF2Q15773 248 aaPredicted RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 BTBD6Q96KE9 485 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 NPY6RQ99463 290 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms