RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NNTQ13423 1086 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 FYB2Q5VWT5 728 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 E4F1Q66K89 784 aaPredicted RBP23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 ZDHHC17Q8IUH5 632 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 CPXM2Q8N436 756 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 ZNF397Q8NF99 534 aaPredicted RBP23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 OLIG1Q8TAK6 271 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 FCRL2Q96LA5 508 aaPredicted RBP23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 BBS2Q9BXC9 721 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 SYNCQ9H7C4 482 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 PRMT8Q9NR22 394 aaPredicted RBP23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 IFNKQ9P0W0 207 aa23.38■■□□□ 1.33
ECHDC1-203ENST00000368291 A0A0A0MRY4 1105 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 LRRC53A6NM62 1247 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 NEDD8-MDP1E9PL57 170 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 GFRA2O00451 464 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 TRIM24O15164 1050 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 IRAK2O43187 625 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 CACNG3O60359 315 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 HSF2BPO75031 334 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 TULP3O75386 442 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 CHRM1P11229 460 aaPredicted RBP23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 UNGP13051 313 aaPredicted RBP23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 CHKAP35790 457 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 ZNF445P59923 1031 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 NHLH1Q02575 133 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 DCAF6Q58WW2 860 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 TOGARAM2Q6ZUX3 1019 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 SPEM1Q8N4L4 309 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 EXOC4Q96A65 974 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 SERPINB11Q96P15 392 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 PNKPQ96T60 521 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 SYT11Q9BT88 431 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 WDR35Q9P2L0 1181 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 TLR6Q9Y2C9 796 aa23.37■■□□□ 1.33
ECHDC1-203ENST00000368291 LAMTOR5O43504 91 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 RNF40O75150 1001 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 TRUB2O95900 331 aaKnown RBP23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 FERP16591 822 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 FBXO43Q4G163 708 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 FIGNQ5HY92 759 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 TRIM72Q6ZMU5 477 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 SLC30A5Q8TAD4 765 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 BHMTQ93088 406 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 AGPAT1Q99943 283 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 PLK2Q9NYY3 685 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 FBXO10Q9UK96 956 aa23.36■■□□□ 1.33
ECHDC1-203ENST00000368291 DAB1O75553 588 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 LATS1O95835 1130 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 PENKP01210 267 aaPredicted RBP23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 SP9P0CG40 484 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 MMP8P22894 467 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 SCNN1AP37088 669 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 SATB1Q01826 763 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 KDSRQ06136 332 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 PTP4A2Q12974 167 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 UNC45BQ8IWX7 931 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 ADAM33Q9BZ11 813 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 EDEM3Q9BZQ6 932 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 FBXO4Q9UKT5 387 aa23.35■■□□□ 1.33
ECHDC1-203ENST00000368291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 KAT7O95251 611 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 TDGF1P13385 188 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 CENPCQ03188 943 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 CLEC16AQ2KHT3 1053 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 ADGRF1Q5T601 910 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 OTUD1Q5VV17 481 aaPredicted RBP23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 NUGGCQ68CJ6 796 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 NADSYN1Q6IA69 706 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 TSSK4Q6SA08 328 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 MMS22LQ6ZRQ5 1243 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 RNF214Q8ND24 703 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 AZIN2Q96A70 460 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 XPO4Q9C0E2 1151 aaKnown RBP23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 ARHGEF4Q9NR80 690 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 FAM86C1Q9NVL1 165 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 AIPL1Q9NZN9 384 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 CALCOCO1Q9P1Z2 691 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 DEC1Q9P2X7 70 aa23.34■■□□□ 1.33
ECHDC1-203ENST00000368291 CHURC1-FNTBB4DL54 471 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 ACSL4O60488 711 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 APODP05090 189 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 CISD3P0C7P0 127 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 HOXC13P31276 330 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 SLC6A4P31645 630 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 NOS2P35228 1153 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 GRIA2P42262 883 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 CCR3P51677 355 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 FAM133BQ5BKY9 247 aaKnown RBP23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 TRNP1Q6NT89 227 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 RPLP0P6Q8NHW5 317 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 XPO6Q96QU8 1125 aaKnown RBP23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 PHOX2BQ99453 314 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 DNAJC17Q9NVM6 304 aaKnown RBP23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 POLR3BQ9NW08 1133 aaPredicted RBP23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 TMEM59LQ9UK28 342 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 CLEC4EQ9ULY5 219 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 EML5Q05BV3 1969 aa23.33■■□□□ 1.33
ECHDC1-203ENST00000368291 GOLGA6L7A0A1B0GV03 622 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 CCDC172P0C7W6 258 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms