RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ARL4AP40617 200 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SULT1E1P49888 294 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 DPYSL2Q16555 572 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 HIF1AQ16665 826 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 UPP1Q16831 310 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SLC25A52Q3SY17 297 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PPP6R3Q5H9R7 873 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 C4orf22Q6V702 233 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SPRED2Q7Z698 418 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PRUNE1Q86TP1 453 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 RTN4RL1Q86UN2 441 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PSTKQ8IV42 348 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 CDKL3Q8IVW4 592 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 ADAM2Q99965 735 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 DHX35Q9H5Z1 703 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 AP4E1Q9UPM8 1137 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PRRC2BQ5JSZ5 2229 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 EPOPA6NHQ4 379 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 ATP2C2O75185 946 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 CDH16O75309 829 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 AP1G2O75843 785 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 ZBED1O96006 694 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 NR2C2P49116 596 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 DSC3Q14574 896 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 ZC3H12AQ5D1E8 599 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SLC9A4Q6AI14 798 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 C1orf228Q6PIY5 440 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 BZW1Q7L1Q6 419 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 ZC3H18Q86VM9 953 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PRCCQ92733 491 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SMARCD1Q96GM5 515 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 FERMT1Q9BQL6 677 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 C11orf84Q9BUA3 381 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 GPATCH2LQ9NWQ4 482 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PAK5Q9P286 719 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 RCOR3Q9P2K3 495 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 LRFN2Q9ULH4 789 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CLDN5O00501 218 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CAPN9O14815 690 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CYP2F1P24903 491 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 RPL22P35268 128 aaKnown RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 TKTL1P51854 596 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 ERVK-21P61565 698 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 NR1H3Q13133 447 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 TUSC3Q13454 348 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 DCAF6Q58WW2 860 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 FAM35AQ86V20 835 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 ZBED8Q8IZ13 594 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 DEFB106AQ8N104 65 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 PDIK1LQ8N165 341 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 PLD5Q8N7P1 536 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CENPTQ96BT3 561 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
H3F3A-202ENST00000366814 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 POPDC2Q9HBU9 364 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CNGB3Q9NQW8 809 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 MIOSQ9NXC5 875 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 RRN3Q9NYV6 651 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 HEY1Q9Y5J3 304 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
H3F3A-202ENST00000366814 EXOC1LA0A1B0GW35 172 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 E7EVH7 732 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 EBAG9O00559 213 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 ZNF189O75820 626 aaPredicted RBP11.27□□□□□ -0.6
H3F3A-202ENST00000366814 B3GAT3O94766 335 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 POMCP01189 267 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 L1CAMP32004 1257 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 MMP13P45452 471 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 AIF1P55008 147 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 GDF10P55107 478 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 XRCC4Q13426 336 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 MAPRE1Q15691 268 aaKnown RBP11.27□□□□□ -0.6
H3F3A-202ENST00000366814 RAB6CQ53S08 254 aa11.27□□□□□ -0.6
H3F3A-202ENST00000366814 NPNTQ6UXI9 565 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms