RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 STX18Q9P2W9 335 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 G3BP2Q9UN86 482 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 PLA2G4CQ9UP65 541 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 HBS1LQ9Y450 684 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 NME7Q9Y5B8 376 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 C2CD4BA6NLJ0 364 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 E7ENQ6 273 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 DNAJC6O75061 913 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ATXN3P54252 364 aaPredicted RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 XRRA1Q6P2D8 792 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ZPBP2Q6X784 338 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMC3-201ENST00000361804 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 PGBD4Q96DM1 585 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 MCRS1Q96EZ8 462 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 PCDH18Q9HCL0 1135 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 NRBP2Q9NSY0 501 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 GINS2Q9Y248 185 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 DNAJC16Q9Y2G8 782 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 CCDC78A2IDD5 438 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 LIN7AO14910 233 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 MAP3K7O43318 606 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 CILPO75339 1184 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 PFKMP08237 780 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 RABGGTBP53611 331 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 AP1B1Q10567 949 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 MPZL3Q6UWV2 235 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 MAVSQ7Z434 540 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 PPP1R14CQ8TAE6 165 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 EBF3Q9H4W6 596 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 KRT37O76014 449 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 VTNP04004 478 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 WDR78Q5VTH9 848 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 LGMNQ99538 433 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 ZNF184Q99676 751 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 RPF1Q9H9Y2 349 aaKnown RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 PDGFCQ9NRA1 345 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 RNASEH1O60930 286 aaKnown RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 GSRP00390 522 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 APOEP02649 317 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 BIRC2Q13490 618 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 FASTKD1Q53R41 847 aaKnown RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 GPC2Q8N158 579 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 LINC01465Q8N7H1 131 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 STKLD1Q8NE28 680 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 CCDC106Q9BWC9 280 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 DHX35Q9H5Z1 703 aaKnown RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 ASNSD1Q9NWL6 643 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 EMCNQ9ULC0 261 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 USP12O75317 370 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 IRX1P78414 480 aaPredicted RBP10.94□□□□□ -0.66
SMC3-201ENST00000361804 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 CMC1Q7Z7K0 106 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 ZBTB8OSQ8IWT0 167 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 C7orf31Q8N865 590 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 MTBPQ96DY7 904 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 SIGLEC10Q96LC7 697 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 FETUBQ9UGM5 382 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
SMC3-201ENST00000361804 SKIP12755 728 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 ENPEPQ07075 957 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 KRT72Q14CN4 511 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 GLRA4Q5JXX5 417 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 N4BP2L1Q5TBK1 243 aaPredicted RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 SLC30A9Q6PML9 568 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 HPDLQ96IR7 371 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 BCO2Q9BYV7 579 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 XAB2Q9HCS7 855 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 SEPT10Q9P0V9 454 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 SIRPGQ9P1W8 387 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 ASB3Q9Y575 518 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 A0A087WZ62 844 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 SPECC1L-ADORA2AF8WAN1 911 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 NOP56O00567 594 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 TPP1O14773 563 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 APOL1O14791 398 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 TGDSO95455 350 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 ALDOAP04075 364 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 BPGMP07738 259 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 CCR10P46092 362 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 PAPOLAP51003 745 aaKnown RBP10.93□□□□□ -0.66
SMC3-201ENST00000361804 SATB1Q01826 763 aa10.93□□□□□ -0.66
SMC3-201ENST00000361804 USP4Q13107 963 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms