RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 UCMAQ8WVF2 138 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 ADAMTS14Q8WXS8 1223 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 DUSP16Q9BY84 665 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 ZDHHC5Q9C0B5 715 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 MIR1-1HGQ9H1L0 117 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 USP3Q9Y6I4 520 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 NPC1O15118 1278 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 CALUO43852 315 aaPredicted RBP22.16■■□□□ 1.14
CD47-202ENST00000361309 F13A1P00488 732 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 TRIM49P0CI25 452 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 TRIM49CP0CI26 452 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 CORO1AP31146 461 aaKnown RBP22.16■■□□□ 1.14
CD47-202ENST00000361309 GCLMP48507 274 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 TPMTP51580 245 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 ZNF132P52740 706 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 COG7P83436 770 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 SCAPQ12770 1279 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 EFEMP1Q12805 493 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 ENPP2Q13822 863 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 PROSER1Q86XN7 944 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 TMPRSS6Q8IU80 811 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 CDK5RAP1Q96SZ6 601 aaKnown RBP22.16■■□□□ 1.14
CD47-202ENST00000361309 NIF3L1Q9GZT8 377 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 CLIC5Q9NZA1 410 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 NFE2L3Q9Y4A8 694 aa22.16■■□□□ 1.14
CD47-202ENST00000361309 SYNCRIPO60506 623 aaKnown RBP22.15■■□□□ 1.14
CD47-202ENST00000361309 PPP3CAQ08209 521 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 ZNF394Q53GI3 561 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 DCAF12L1Q5VU92 463 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 CADM4Q8NFZ8 388 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 SIPA1Q96FS4 1042 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 PIWIL1Q96J94 861 aaKnown RBP22.15■■□□□ 1.14
CD47-202ENST00000361309 DCLK3Q9C098 648 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 MMRN2Q9H8L6 949 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 AGO1Q9UL18 857 aaKnown RBP22.15■■□□□ 1.14
CD47-202ENST00000361309 CLEC4EQ9ULY5 219 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 TRAF3IP3Q9Y228 551 aa22.15■■□□□ 1.14
CD47-202ENST00000361309 GOLGA4Q13439 2230 aaKnown RBP22.15■■□□□ 1.14
CD47-202ENST00000361309 MAPK13O15264 365 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 ZNF234Q14588 700 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 ATL3Q6DD88 541 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 ANKS1BQ7Z6G8 1248 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 DENND1CQ8IV53 801 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 PRCCQ92733 491 aaPredicted RBP22.14■■□□□ 1.13
CD47-202ENST00000361309 DNAI2Q9GZS0 605 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 IL21RQ9HBE5 538 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 ELOVL2Q9NXB9 296 aa22.14■■□□□ 1.13
CD47-202ENST00000361309 METTL12A8MUP2 240 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 CBFA2T3O75081 653 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 NR2F2P24468 414 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 PRKCHP24723 683 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 OXTRP30559 389 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 COPAP53621 1224 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 INTS8Q75QN2 995 aaKnown RBP22.13■■□□□ 1.13
CD47-202ENST00000361309 SLCO6A1Q86UG4 719 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 CACUL1Q86Y37 369 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 SETD7Q8WTS6 366 aaKnown RBP22.13■■□□□ 1.13
CD47-202ENST00000361309 SORCS1Q8WY21 1168 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 HEXIM2Q96MH2 286 aaKnown RBP22.13■■□□□ 1.13
CD47-202ENST00000361309 GAREM1Q9H706 876 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 MARCH2Q9P0N8 246 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 RCOR1Q9UKL0 485 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 PCOLCE2Q9UKZ9 415 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 CFAP45Q9UL16 551 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 APOBEC2Q9Y235 224 aaKnown RBP22.13■■□□□ 1.13
CD47-202ENST00000361309 APC2O95996 2303 aa22.13■■□□□ 1.13
CD47-202ENST00000361309 TP53BP1Q12888 1972 aaPredicted RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 BCAT2O15382 392 aaPredicted RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 CYBBP04839 570 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 ACADMP11310 421 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 KRT13P13646 458 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 DNM1Q05193 864 aaKnown RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 TMEM215Q68D42 235 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 CCNI2Q6ZMN8 369 aaPredicted RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 GLRX5Q86SX6 157 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 CPXM2Q8N436 756 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 RBBP8NLQ8NC74 664 aaPredicted RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 CCDC150Q8NCX0 1101 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 DDI1Q8WTU0 396 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 NUP58Q9BVL2 599 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 CIPCQ9C0C6 399 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 EIF2B4Q9UI10 523 aaKnown RBP22.12■■□□□ 1.13
CD47-202ENST00000361309 STRIP2Q9ULQ0 834 aa22.12■■□□□ 1.13
CD47-202ENST00000361309 A0A1B0GVL5 298 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 SLC12A8A0AV02 714 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 CER1O95813 267 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 IGLV3-19P01714 112 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 EPHX1P07099 455 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 PFKFB1P16118 471 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 MATKP42679 507 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 BNC1Q01954 994 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 EIF4HQ15056 248 aaKnown RBP22.11■■□□□ 1.13
CD47-202ENST00000361309 E2F5Q15329 346 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 NFIL3Q16649 462 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 RSRC2Q7L4I2 434 aaKnown RBP22.11■■□□□ 1.13
CD47-202ENST00000361309 FAM186BQ8IYM0 893 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 ARHGAP18Q8N392 663 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 TM7SF3Q9NS93 570 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 MAPK8IP1Q9UQF2 711 aa22.11■■□□□ 1.13
CD47-202ENST00000361309 FNDC3AQ9Y2H6 1198 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms