RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
NFIX-201ENST00000358552 CREMQ03060 361 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 LLGL1Q15334 1064 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TRADDQ15628 312 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 FAM153CQ494X1 144 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PPP6R3Q5H9R7 873 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 ZDHHC24Q6UX98 284 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PPP1R21Q6ZMI0 780 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 C10orf67Q8IYJ2 551 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TXLNGYQ9BZA5 131 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 GPR62Q9BZJ7 368 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 OSBPL2Q9H1P3 480 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.78□□□□□ -0.28e-12■■■□□ 17
NFIX-201ENST00000358552 FAM153AQ9UHL3 310 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 SHOC2Q9UQ13 582 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 NAALADL1Q9UQQ1 740 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PLAAQ9Y263 795 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 FNDC1Q4ZHG4 1894 aaPredicted RBP13.77□□□□□ -0.2
NFIX-201ENST00000358552 FYNP06241 537 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 CD48P09326 243 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 NUDT17P0C025 328 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 CPB1P15086 417 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 ITGB8P26012 769 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 HSD17B3P37058 310 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 DYNLT1P63172 113 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 PPP2R5DQ14738 602 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 P3H1Q32P28 736 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 CEP85LQ5SZL2 805 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 SYPL2Q5VXT5 272 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 TPGS2Q68CL5 300 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 KIAA1841Q6NSI8 718 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 DARS2Q6PI48 645 aaKnown RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 FAM131BQ86XD5 332 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 SCN4BQ8IWT1 228 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 ZNF276Q8N554 614 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 PCDH19Q8TAB3 1148 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 ARL8AQ96BM9 186 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 ACSF2Q96CM8 615 aaPredicted RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 ZNF689Q96CS4 500 aaPredicted RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 RTP4Q96DX8 246 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 IGSF21Q96ID5 467 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 TTC25Q96NG3 672 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 ZNF558Q96NG5 402 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 SERPINB11Q96P15 392 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 EPAS1Q99814 870 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 STMN4Q9H169 189 aaPredicted RBP13.77□□□□□ -0.21
NFIX-201ENST00000358552 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 PAK5Q9P286 719 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
NFIX-201ENST00000358552 MTSS1O43312 755 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 STK10O94804 968 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 EFEMP2O95967 443 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 CCR1P32246 355 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 SERPINB6P35237 376 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 ITGA8P53708 1063 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 CACNA2D1P54289 1103 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 NME3Q13232 169 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 ZC3H12AQ5D1E8 599 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 COL13A1Q5TAT6 717 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 DENND2CQ68D51 928 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 RHBDF2Q6PJF5 856 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 DENND5BQ6ZUT9 1274 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 PQLC3Q8N755 202 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 UBLCP1Q8WVY7 318 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 TMEM169Q96HH4 297 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 SMOC2Q9H3U7 446 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 WDR6Q9NNW5 1121 aaKnown RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PRKAG2Q9UGJ0 569 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 SLC12A6Q9UHW9 1150 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PTPRDP23468 1912 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 H7C0C1 242 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 PPP1R12AO14974 1030 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 SOD2P04179 222 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 HAPLN1P10915 354 aaPredicted RBP13.76□□□□□ -0.21
NFIX-201ENST00000358552 MX2P20592 715 aa13.76□□□□□ -0.21
NFIX-201ENST00000358552 YWHAQP27348 245 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms