RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ADAM33Q9BZ11 813 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 DCLK3Q9C098 648 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 MTMR12Q9C0I1 747 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 EHD4Q9H223 541 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ACTR8Q9H981 624 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ADARB2Q9NS39 739 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 ARHGAP28Q9P2N2 729 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 VANGL2Q9ULK5 521 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 AXIN2Q9Y2T1 843 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SNX13Q9Y5W8 968 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 C15orf38-AP3S2A0A0A6YYH1 394 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 WWP2O00308 870 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SGPL1O95470 568 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 STAU1O95793 577 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 SERPINF2P08697 491 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SOX11P35716 441 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CD151P48509 253 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SARSP49591 514 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 OTUD4Q01804 1114 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 CREMQ03060 361 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 C1QBPQ07021 282 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 DNAJC3Q13217 504 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 RCN1Q15293 331 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ERMARDQ5T6L9 678 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ARPINQ7Z6K5 226 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 C4orf19Q8IY42 314 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 RTL3Q8N8U3 475 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 ATG16L2Q8NAA4 619 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CPNE1Q99829 537 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 RUSC1Q9BVN2 902 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 KLK14Q9P0G3 267 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 DUSP12Q9UNI6 340 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PNPLA6Q8IY17 1366 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CAMSAP1Q5T5Y3 1602 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 FAM20BO75063 409 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 KATNA1O75449 491 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ALDH2P05091 517 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 FASP25445 335 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TARSP26639 723 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 CYP24A1Q07973 514 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TRIQKQ629K1 86 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 KRT73Q86Y46 540 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 MIB1Q86YT6 1006 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TMEM132CQ8N3T6 1108 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 POMGNT2Q8NAT1 580 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 OR56A4Q8NGH8 313 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ACTRT2Q8TDY3 377 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 GMCL1Q96IK5 515 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 BDH2Q9BUT1 245 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SPRTNQ9H040 489 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 NOD2Q9HC29 1040 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ZCCHC17Q9NP64 241 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 CHORDC1Q9UHD1 332 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SETBP1Q9Y6X0 1596 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 A0A087X1B8 175 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 FAM205CA6NFA0 338 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ECDO95905 644 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 AMHP03971 560 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PAICSP22234 425 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 PIK3R1P27986 724 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CYP2A13Q16696 494 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TRMT5Q32P41 509 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 SLC44A4Q53GD3 710 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PAGE2BQ5JRK9 111 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SCARA3Q6AZY7 606 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 NEK5Q6P3R8 708 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CBWD2Q8IUF1 395 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 EPHX4Q8IUS5 362 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SLC44A2Q8IWA5 706 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 KIF2BQ8N4N8 673 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CASKIN2Q8WXE0 1202 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 MTG1Q9BT17 334 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 TMEM39BQ9GZU3 492 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TMBIM4Q9HC24 238 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PCDH9Q9HC56 1237 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 STARD7Q9NQZ5 370 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 DLGAP2Q9P1A6 1054 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 COPG2Q9UBF2 871 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TRPC4Q9UBN4 977 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PLAGL2Q9UPG8 496 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TRIM66O15016 1216 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ERN1O75460 977 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 GNRH1P01148 92 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 FEN1P39748 380 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 IRAK1P51617 712 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TRAF2Q12933 501 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 MARC1Q5VT66 337 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 LRRC34Q8IZ02 419 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 STK40Q8N2I9 435 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 ENGASEQ8NFI3 743 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SMARCD1Q96GM5 515 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PPP1R16AQ96I34 528 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 TMEM120AQ9BXJ8 343 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SLC39A8Q9C0K1 460 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 DCLRE1BQ9H816 532 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SENP2Q9HC62 589 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms