RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 GALNT8Q9NY28 637 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 HEMK1Q9Y5R4 338 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 STYXL1Q9Y6J8 313 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ADGRA2Q96PE1 1338 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PRPSAP2O60256 369 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 EGFRP00533 1210 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 FGF3P11487 239 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TCN1P20061 433 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PMLP29590 882 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 IDH3AP50213 366 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PKNOX1P55347 436 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TAP1Q03518 808 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CYP4V2Q6ZWL3 525 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PCDH19Q8TAB3 1148 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 USP13Q92995 863 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CLMNQ96JQ2 1002 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 GJD4Q96KN9 370 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 HEXIM2Q96MH2 286 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 XYLT2Q9H1B5 865 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 RNF19AQ9NV58 838 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 UBAP1Q9NZ09 502 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 UBR3Q6ZT12 1888 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 SPDYE16A6NNV3 312 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 WDR46O15213 610 aaKnown RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 CHADO15335 359 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 ZBTB14O43829 449 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 PLA2G6O60733 806 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 AMHP03971 560 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 ALDOAP04075 364 aaKnown RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 CXCL8P10145 99 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 IL4RP24394 825 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 NAMPTP43490 491 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 PHKA2P46019 1235 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 CCR10P46092 362 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 MRPS22P82650 360 aaKnown RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 PDE1CQ14123 709 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 Q3C1V9 767 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 MBLAC2Q68D91 279 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 PTAR1Q7Z6K3 402 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-203ENST00000356147 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 RNF149Q8NC42 400 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 TRAPPC12Q8WVT3 735 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 AKT1S1Q96B36 256 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 MARK4Q96L34 752 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 RNF157Q96PX1 679 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 ELOVL4Q9GZR5 314 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 KLC2Q9H0B6 622 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 TMEM216Q9P0N5 145 aa10.46□□□□□ -0.73
PTPRA-203ENST00000356147 VWA5AO00534 786 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 NDC80O14777 642 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 PEX1O43933 1283 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 OATP04181 439 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 SUPT20HL2P0C7V6 817 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 AOC1P19801 751 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 CNTN2Q02246 1040 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 WASHC5Q12768 1159 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 SUPT20HL1Q3ZLR7 823 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 FAM91A1Q658Y4 838 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF534Q76KX8 674 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 TMC7Q7Z402 723 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.46□□□□□ -0.74
PTPRA-203ENST00000356147 FAM156AQ8NDB6 213 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 ICA1LQ8NDH6 482 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 SIGLEC10Q96LC7 697 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 NLRP4Q96MN2 994 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 MIS12Q9H081 205 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 WDR55Q9H6Y2 383 aaPredicted RBP10.46□□□□□ -0.74
PTPRA-203ENST00000356147 GPAMQ9HCL2 828 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 PAK5Q9P286 719 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 SYNPO2Q9UMS6 1093 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 DTNAQ9Y4J8 743 aa10.46□□□□□ -0.74
PTPRA-203ENST00000356147 CCDC78A2IDD5 438 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 STX16-NPEPL1H3BU86 382 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 PABPC4LP0CB38 370 aaKnown RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 PRKCHP24723 683 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 CRHR1P34998 444 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 CHN2P52757 468 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ACAP1Q15027 740 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 TAZQ16635 292 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 RSBN1LQ6PCB5 846 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 UGT2A3Q6UWM9 527 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 KYAT3Q6YP21 454 aaKnown RBP10.45□□□□□ -0.74
PTPRA-203ENST00000356147 WDR49Q8IV35 697 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 METTL25Q8N6Q8 603 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 MAPK15Q8TD08 544 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 LPIN3Q9BQK8 851 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 B3GNT5Q9BYG0 378 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 H3BNX3 289 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ITGB3P05106 788 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 NFICP08651 508 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ERVK-10P10266 1014 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 ARL2P36404 184 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 MLH1P40692 756 aa10.45□□□□□ -0.74
PTPRA-203ENST00000356147 SLC10A2Q12908 348 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms