RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 HMBSP08397 361 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 IRF1P10914 325 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 CCR1P32246 355 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 DEUP1Q05D60 604 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 NME3Q13232 169 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 CCDC14Q49A88 953 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 TRNP1Q6NT89 227 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 STRADAQ7RTN6 431 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 ST13P5Q8NFI4 369 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-201ENST00000356017 RNF34Q969K3 372 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 ARHGEF26Q96DR7 871 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 SLC39A13Q96H72 371 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 LRRC3BQ96PB8 259 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 TBCBQ99426 244 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 PLA2G2FQ9BZM2 168 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 SLC12A6Q9UHW9 1150 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 NUP210Q8TEM1 1887 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 MYO1FO00160 1098 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 ENDOD1O94919 500 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 LATS1O95835 1130 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 APOEP02649 317 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 ASGR2P07307 311 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 RDXP35241 583 aaKnown RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 PITX1P78337 314 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 ATP11AP98196 1134 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 ACAP1Q15027 740 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 ZNF564Q8TBZ8 553 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 OSCP1Q8WVF1 389 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 RFFLQ8WZ73 363 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 IRF7Q92985 503 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 AZIN2Q96A70 460 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 NCAPGQ9BPX3 1015 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 WDCPQ9H6R7 721 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
TRIM13-201ENST00000356017 SORCS3Q9UPU3 1222 aa16.17■□□□□ 0.18
TRIM13-201ENST00000356017 SYNJ2BP-COX16A0A087WUM0 186 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 GREM1O60565 184 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PSMA2P25787 234 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CORO1AP31146 461 aaKnown RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CHKAP35790 457 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 SLC11A2P49281 568 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 GRM2Q14416 872 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PIGHQ14442 188 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PPP2R5DQ14738 602 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 TCEAL1Q15170 157 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PDGFRLQ15198 375 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 BRMS1LQ5PSV4 323 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 RNF135Q8IUD6 432 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 FCRL2Q96LA5 508 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 BRD9Q9H8M2 597 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 COX16Q9P0S2 106 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 IP6K2Q9UHH9 426 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 ANAPC7Q9UJX3 599 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 RNF8O76064 485 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 TFE3P19532 575 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 GDI1P31150 447 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 IFNAR2P48551 515 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CXCR3P49682 368 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 VAV2P52735 878 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CCZ1BP86790 482 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CCZ1P86791 482 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PFKPQ01813 784 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CDO1Q16878 200 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 C15orf59Q2T9L4 293 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 ZC3H12AQ5D1E8 599 aaKnown RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 OTUD1Q5VV17 481 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 Q6ZNB5 142 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 KIAA1328Q86T90 577 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 DENND1CQ8IV53 801 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 ATP6V0D2Q8N8Y2 350 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 ATP2A3Q93084 1043 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 BTN2A3PQ96KV6 586 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 CALR3Q96L12 384 aaKnown RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 UHRF1Q96T88 793 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 DDX50Q9BQ39 737 aaKnown RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 FAM83CQ9BQN1 747 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 PIGVQ9NUD9 493 aa16.16■□□□□ 0.18
TRIM13-201ENST00000356017 AGO1Q9UL18 857 aaKnown RBP16.16■□□□□ 0.18
TRIM13-201ENST00000356017 A0A0A6YYK5 440 aaPredicted RBP16.15■□□□□ 0.18
TRIM13-201ENST00000356017 CCP110O43303 1012 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 MTA2O94776 668 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 KLKB1P03952 638 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 SRFP11831 508 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 ARL13BQ3SXY8 428 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 ACRBPQ8NEB7 543 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 ADAM33Q9BZ11 813 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 TRPV5Q9NQA5 729 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 STOML2Q9UJZ1 356 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 REXO2Q9Y3B8 237 aaKnown RBP16.15■□□□□ 0.18
TRIM13-201ENST00000356017 WNT6Q9Y6F9 365 aa16.15■□□□□ 0.18
TRIM13-201ENST00000356017 KCNU1A8MYU2 1149 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms