RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 DRICH1Q6PGQ1 229 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CCDC137Q6PK04 289 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 HDAC7Q8WUI4 952 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 C1orf54Q8WWF1 131 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 RUBCNQ92622 972 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 RNF157Q96PX1 679 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CDK5RAP1Q96SZ6 601 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 MAK16Q9BXY0 300 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PARD6BQ9BYG5 372 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 MAGEB5Q9BZ81 275 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 DCLK3Q9C098 648 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TKTL2Q9H0I9 626 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ANLNQ9NQW6 1124 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ARHGEF38Q9NXL2 777 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 STIM2Q9P246 746 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 NUDT5Q9UKK9 219 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TLR6Q9Y2C9 796 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 R3HDM2Q9Y2K5 976 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ZNF840PA6NDX5 716 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 H3BNC9 293 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 APOC4-APOC2K7ER74 178 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TLR5O60602 858 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 GLUD1P00367 558 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 APOC2P02655 101 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SPATA31D3P0C874 917 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 COILP38432 576 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PBX2P40425 430 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PPP3CCP48454 512 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CLCN4P51793 760 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 DR1Q01658 176 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SEMA3BQ13214 749 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SLC9A4Q6AI14 798 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 WDR93Q6P2C0 686 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SPATA31D4Q6ZUB0 917 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CCDC149Q6ZUS6 474 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 RTL10Q7L3V2 364 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 DNAJB7Q7Z6W7 309 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ITIH5Q86UX2 942 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 RFX6Q8HWS3 928 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TNS4Q8IZW8 715 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PYROXD2Q8N2H3 581 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TTC13Q8NBP0 860 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 KREMEN2Q8NCW0 462 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PCDH19Q8TAB3 1148 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ATG4AQ8WYN0 398 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SLCO2A1Q92959 643 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 ZNF512Q96ME7 567 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CSPG4P5Q96PW8 444 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PNKPQ96T60 521 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 PBX4Q9BYU1 374 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 FRMD8P1Q9BZ68 369 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 TMPRSS4Q9NRS4 437 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 CWC15Q9P013 229 aaKnown RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 UXTQ9UBK9 157 aaPredicted RBP9.97□□□□□ -0.81
NPHP1-202ENST00000355301 RAB21Q9UL25 225 aa9.97□□□□□ -0.81
NPHP1-202ENST00000355301 KCNU1A8MYU2 1149 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 LPXNO60711 386 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 SLC2A3P11169 496 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 IRS1P35568 1242 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 ARL4AP40617 200 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 TUBP50607 506 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 ZNF135P52742 658 aaPredicted RBP9.96□□□□□ -0.81
NPHP1-202ENST00000355301 MRPS25P82663 173 aaKnown RBP9.96□□□□□ -0.81
NPHP1-202ENST00000355301 SLC7A5Q01650 507 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 EFEMP1Q12805 493 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 TAF12Q16514 161 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 KLHDC10Q6PID8 442 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 TADA2BQ86TJ2 420 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 PQLC3Q8N755 202 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.96□□□□□ -0.81
NPHP1-202ENST00000355301 MICAL1Q8TDZ2 1067 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 ANKRD7Q92527 254 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 RNF34Q969K3 372 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 HAPLN3Q96S86 360 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 OSBPL2Q9H1P3 480 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 TRPM5Q9NZQ8 1165 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 MARCH2Q9P0N8 246 aa9.96□□□□□ -0.81
NPHP1-202ENST00000355301 FEZ2Q9UHY8 353 aaPredicted RBP9.96□□□□□ -0.81
NPHP1-202ENST00000355301 MTCL1Q9Y4B5 1905 aaKnown RBP9.96□□□□□ -0.82
NPHP1-202ENST00000355301 TTI1O43156 1089 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 LIASO43766 372 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 HEXIM1O94992 359 aaKnown RBP9.95□□□□□ -0.82
NPHP1-202ENST00000355301 TBX18O95935 607 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 LRG1P02750 347 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 C8AP07357 584 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 GOT1P17174 413 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 TGM2P21980 687 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 MCM3P25205 808 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 PTGIRP43119 386 aa9.95□□□□□ -0.82
NPHP1-202ENST00000355301 KCNJ1P48048 391 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms