RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PDZD4Q76G19 769 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 VN1R2Q8NFZ6 395 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 TTYH1Q9H313 450 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 L2HGDHQ9H9P8 463 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 AP4E1Q9UPM8 1137 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 LRRD1A4D1F6 860 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF197O14709 1029 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 MSI1O43347 362 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 COCHO43405 550 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 IGLV3-27P01718 113 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 APOEP02649 317 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 MYL4P12829 197 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PTPN7P35236 360 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ADRA1BP35368 520 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 TBX4P57082 545 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 COG7P83436 770 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 CKAP4Q07065 602 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 HYAL1Q12794 435 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ARHGAP15Q53QZ3 475 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 RAB6CQ53S08 254 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 KCNT1Q5JUK3 1230 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 TXNRD3NBQ6F5E7 133 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 MIB1Q86YT6 1006 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 CCDC50Q8IVM0 306 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 RASGEF1CQ8N431 466 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 KCTD6Q8NC69 237 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ACTRT1Q8TDG2 376 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 COG1Q8WTW3 980 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 SMG7Q92540 1137 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 HSPH1Q92598 858 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF707Q96C28 371 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 RAB6CQ9H0N0 254 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ARHGEF38Q9NXL2 777 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 RCOR3Q9P2K3 495 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 SFMBT1Q9UHJ3 866 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 RASAL2Q9UJF2 1139 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 NUDT5Q9UKK9 219 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 EFR3BQ9Y2G0 817 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 NUP210Q8TEM1 1887 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 CEP104O60308 925 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 OLFM2O95897 454 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PAFAH1B1P43034 410 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ATXN1P54253 815 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 FAM71BQ8TC56 605 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 PLD4Q96BZ4 506 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 SLC39A13Q96H72 371 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 HAPLN3Q96S86 360 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 DNMT3BQ9UBC3 853 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 FZD10Q9ULW2 581 aa15.09■□□□□ 0.01
NIPAL3-202ENST00000339255 TRAV19A0A0A6YYK7 116 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 A0A1W2PRU2 124 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 C2orf78A6NCI8 922 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 SRGAP2O75044 1071 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 GLP2RO95838 553 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 TBX18O95935 607 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 PYGMP11217 842 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 KDELR1P24390 212 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 KRT81Q14533 505 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 ZC3H12AQ5D1E8 599 aaKnown RBP15.08■□□□□ 0
NIPAL3-202ENST00000339255 CREG2Q8IUH2 290 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 UNC45BQ8IWX7 931 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 MNS1Q8NEH6 495 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 MAIP1Q8WWC4 291 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 BTN2A3PQ96KV6 586 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 FCRL2Q96LA5 508 aaPredicted RBP15.08■□□□□ 0
NIPAL3-202ENST00000339255 ZNF670Q9BS34 389 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 CALN1Q9BXU9 219 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 TKTL2Q9H0I9 626 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 IGFLR1Q9H665 355 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 PRDM16Q9HAZ2 1276 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 HCFC1R1Q9NWW0 138 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 DOCK4Q8N1I0 1966 aa15.08■□□□□ 0
NIPAL3-202ENST00000339255 SLC12A8A0AV02 714 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 C3orf70A6NLC5 250 aaPredicted RBP15.07■□□□□ 0
NIPAL3-202ENST00000339255 KCNU1A8MYU2 1149 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 ZNF185O15231 689 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 HDCP19113 662 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 HTR7P34969 479 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 0
NIPAL3-202ENST00000339255 CDKN2BP42772 138 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 CDH6P55285 790 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
NIPAL3-202ENST00000339255 ZNF211Q13398 564 aaPredicted RBP15.07■□□□□ 0
NIPAL3-202ENST00000339255 GRIN2CQ14957 1233 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 TAZQ16635 292 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 ATP13A4Q4VNC1 1196 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 SPOCD1Q6ZMY3 1216 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 ATP6V0D2Q8N8Y2 350 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 SHKBP1Q8TBC3 707 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 RAPGEF5Q92565 580 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 RPGRIP1Q96KN7 1286 aa15.07■□□□□ 0
NIPAL3-202ENST00000339255 OSBPL8Q9BZF1 889 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms