RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RALAP11233 206 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 CD6P30203 668 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 GCLMP48507 274 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 FUT11Q495W5 492 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 CHCHD4Q8N4Q1 142 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 PRDM16Q9HAZ2 1276 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
LINC01116-202ENST00000339037 FBXO10Q9UK96 956 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 SLC27A6Q9Y2P4 619 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 CEP192Q8TEP8 1941 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 ADAMTS9Q9P2N4 1935 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 MEI4A8MW99 385 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 NPC1O15118 1278 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 MAPK13O15264 365 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 CILPO75339 1184 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 GJB3O75712 270 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 KLKB1P03952 638 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 MYL1P05976 194 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 TRIM49P0CI25 452 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 TRIM49CP0CI26 452 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 PFKFB1P16118 471 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 NR2F2P24468 414 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 CHKAP35790 457 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 ZNF132P52740 706 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 MFAP3P55082 362 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 COG7P83436 770 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 TRIP6Q15654 476 aaKnown RBP16.41■□□□□ 0.22
LINC01116-202ENST00000339037 FYB2Q5VWT5 728 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 INTS8Q75QN2 995 aaKnown RBP16.41■□□□□ 0.22
LINC01116-202ENST00000339037 SCD5Q86SK9 330 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 METTL3Q86U44 580 aaKnown RBP16.41■□□□□ 0.22
LINC01116-202ENST00000339037 ZNF276Q8N554 614 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 CCDC150Q8NCX0 1101 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 P2RY11Q96G91 374 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 TOE1Q96GM8 510 aaKnown RBP16.41■□□□□ 0.22
LINC01116-202ENST00000339037 CAMK1GQ96NX5 476 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 MKRN2Q9H000 416 aaKnown RBP16.41■□□□□ 0.22
LINC01116-202ENST00000339037 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 USP3Q9Y6I4 520 aa16.41■□□□□ 0.22
LINC01116-202ENST00000339037 SH3BP5O60239 455 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 KRT13P13646 458 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 MAOBP27338 520 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 CORO1AP31146 461 aaKnown RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 IL12RB1P42701 662 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 EFEMP1Q12805 493 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 GRIK2Q13002 908 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 GEN1Q17RS7 908 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 RAB44Q7Z6P3 723 aaPredicted RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 NAXDQ8IW45 347 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 UCMAQ8WVF2 138 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 GPR174Q9BXC1 333 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 DCLK3Q9C098 648 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 WSB2Q9NYS7 404 aaPredicted RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
LINC01116-202ENST00000339037 NFE2L3Q9Y4A8 694 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 PCDHB9Q9Y5E1 797 aa16.4■□□□□ 0.22
LINC01116-202ENST00000339037 FAM221BA6H8Z2 402 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 HMBSP08397 361 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 NCAM1P13591 858 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 ENPP2Q13822 863 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 E2F5Q15329 346 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 ZNF394Q53GI3 561 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
LINC01116-202ENST00000339037 ANKS1BQ7Z6G8 1248 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
LINC01116-202ENST00000339037 CADM4Q8NFZ8 388 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 DNASE2BQ8WZ79 361 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 THAP10Q9P2Z0 257 aaPredicted RBP16.39■□□□□ 0.21
LINC01116-202ENST00000339037 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 AGO1Q9UL18 857 aaKnown RBP16.39■□□□□ 0.21
LINC01116-202ENST00000339037 HPSEQ9Y251 543 aa16.39■□□□□ 0.21
LINC01116-202ENST00000339037 ACACAQ13085 2346 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 A0A1B0GTW7 788 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 CYBBP04839 570 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 CMA1P23946 247 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 TPMTP51580 245 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 KRT85P78386 507 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 RING1Q06587 406 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 ENPEPQ07075 957 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 EIF4HQ15056 248 aaKnown RBP16.38■□□□□ 0.21
LINC01116-202ENST00000339037 NFIL3Q16649 462 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 DENND1CQ8IV53 801 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 ARHGAP18Q8N392 663 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 TTC39CQ8N584 583 aa16.38■□□□□ 0.21
LINC01116-202ENST00000339037 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
LINC01116-202ENST00000339037 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms