RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 HESX1Q9UBX0 185 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 CYP8B1Q9UNU6 501 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 STON1Q9Y6Q2 735 aa13.99□□□□□ -0.17
NUDCD3-201ENST00000338427 KHNYNO15037 678 aaKnown RBP13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 KCNK5O95279 499 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 IL12RB1P42701 662 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 SGSHP51688 502 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 SLC8A3P57103 927 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 DAOAP59103 153 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 APBA1Q02410 837 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 TRIP4Q15650 581 aaPredicted RBP13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 CNGA2Q16280 664 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 UAP1L1Q3KQV9 507 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 SDE2Q6IQ49 451 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 GJB7Q6PEY0 223 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 NUDT18Q6ZVK8 323 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 TADA2BQ86TJ2 420 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 CREBRFQ8IUR6 639 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 ARHGAP18Q8N392 663 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 IPO9Q96P70 1041 aaKnown RBP13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 GABRG3Q99928 467 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 MIS12Q9H081 205 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 ACP6Q9NPH0 428 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 STRIP2Q9ULQ0 834 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 ZNF510Q9Y2H8 683 aa13.98□□□□□ -0.17
NUDCD3-201ENST00000338427 IGHV1OR15-9A0A0B4J2B8 117 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 FOXD2O60548 495 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 MAOBP27338 520 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 CHKAP35790 457 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 RPL6Q02878 288 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 TRIM61Q5EBN2 209 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 DENND1BQ6P3S1 775 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 KIAA1324Q6UXG2 1013 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 TRMT11Q7Z4G4 463 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 SLC41A1Q8IVJ1 513 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 TRIM59Q8IWR1 403 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 RBBP8NLQ8NC74 664 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 MYEOVQ96EZ4 313 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 MRGPRX1Q96LB2 322 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 CRACR2AQ9BSW2 395 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
NUDCD3-201ENST00000338427 M0QYV0 167 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 PMM2O15305 246 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 TOP3BO95985 862 aaKnown RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 FYNP06241 537 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 PAEPP09466 180 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 HLA-EP13747 358 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 MAPK8P45983 427 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 FUT11Q495W5 492 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 PSAPL1Q6NUJ1 521 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 RFWD3Q6PCD5 774 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 C11orf74Q86VG3 221 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 SCUBE3Q8IX30 993 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 ZNF366Q8N895 744 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 OR2I1PQ8NGU4 316 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 SPACA7Q96KW9 195 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 CDK5RAP1Q96SZ6 601 aaKnown RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 MKRN2Q9H000 416 aaKnown RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 INTS2Q9H0H0 1204 aaKnown RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 ELOVL2Q9NXB9 296 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 SLC27A6Q9Y2P4 619 aa13.96□□□□□ -0.17
NUDCD3-201ENST00000338427 CEP192Q8TEP8 1941 aa13.96□□□□□ -0.18
NUDCD3-201ENST00000338427 ADAMTS9Q9P2N4 1935 aa13.96□□□□□ -0.18
NUDCD3-201ENST00000338427 KCNJ18B7U540 433 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 GFRA2O00451 464 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 SLC9A1P19634 815 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 PRKCHP24723 683 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 PI4KAP42356 2102 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 ZNF132P52740 706 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 ZNF234Q14588 700 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 LYSMD4Q5XG99 296 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 FAM217AQ8IXS0 508 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 CPXM2Q8N436 756 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 TRIML1Q8N9V2 468 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 WFDC5Q8TCV5 224 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 PLD4Q96BZ4 506 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 TMA16Q96EY4 203 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 CIPCQ9C0C6 399 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 FAM124BQ9H5Z6 455 aaPredicted RBP13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 TMEM9BQ9NQ34 198 aa13.95□□□□□ -0.18
NUDCD3-201ENST00000338427 ABCC13Q9NSE7 274 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms