RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MSI1O43347 362 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ENDOD1O94919 500 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 NDUFA10O95299 355 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 LCA5LO95447 670 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 GJB6O95452 261 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 NFATC1O95644 943 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 LATS1O95835 1130 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ALADP13716 330 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CCR1P32246 355 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CHKAP35790 457 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 PTPN9P43378 593 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ZNF143P52747 638 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 KRT83P78385 493 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ATP11AP98196 1134 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 AMPD2Q01433 879 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 RUNX3Q13761 415 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 DNASE1L2Q92874 299 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 SLC39A13Q96H72 371 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 MCEEQ96PE7 176 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 TBCBQ99426 244 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CNPY3Q9BT09 278 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 WDCPQ9H6R7 721 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 MUTYHQ9UIF7 546 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 DUSP12Q9UNI6 340 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 PCDHA13Q9Y5I0 950 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 SOWAHDA6NJG2 315 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 DCXO43602 365 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 NARSO43776 548 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 RNF8O76064 485 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 KLKB1P03952 638 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 CXCR3P49682 368 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ZXDAP98168 799 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 EIF4EBP2Q13542 120 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ARL13BQ3SXY8 428 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 SLC44A4Q53GD3 710 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 Q6ZNB5 142 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 STRADAQ7RTN6 431 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 TXLNBQ8N3L3 684 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 WBP2Q969T9 261 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 EXOC4Q96A65 974 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 ZFYVE19Q96K21 471 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 BTN2A3PQ96KV6 586 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 NUP85Q9BW27 656 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 UVRAGQ9P2Y5 699 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 IP6K2Q9UHH9 426 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 LCMT1Q9UIC8 334 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 FBXL21Q9UKT6 434 aa12.38□□□□□ -0.43
SPTLC1-202ENST00000337841 GREB1Q4ZG55 1949 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 MYO1FO00160 1098 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ACSL4O60488 711 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 GREM1O60565 184 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ADH1CP00326 375 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 CYBBP04839 570 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 GLULP15104 373 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ARSAP15289 507 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 PSMA2P25787 234 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 MLLT6P55198 1093 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 GAD2Q05329 585 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 PIGHQ14442 188 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ACAP1Q15027 740 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 CDO1Q16878 200 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 EML3Q32P44 896 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 RAD9BQ6WBX8 426 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms