RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KRT83P78385 493 aa16■□□□□ 0.15
SEC13-201ENST00000337354 PFKPQ01813 784 aa16■□□□□ 0.15
SEC13-201ENST00000337354 CCDC14Q49A88 953 aa16■□□□□ 0.15
SEC13-201ENST00000337354 SND1Q7KZF4 910 aaKnown RBP eCLIP16■□□□□ 0.153e-11■■■□□ 16.6
SEC13-201ENST00000337354 STRADAQ7RTN6 431 aa16■□□□□ 0.15
SEC13-201ENST00000337354 BNIPLQ7Z465 357 aa16■□□□□ 0.15
SEC13-201ENST00000337354 UBALD2Q8IYN6 164 aa16■□□□□ 0.15
SEC13-201ENST00000337354 EMC1Q8N766 993 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ST13P5Q8NFI4 369 aaPredicted RBP16■□□□□ 0.15
SEC13-201ENST00000337354 CENPIQ92674 756 aaPredicted RBP16■□□□□ 0.15
SEC13-201ENST00000337354 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
SEC13-201ENST00000337354 MCEEQ96PE7 176 aa16■□□□□ 0.15
SEC13-201ENST00000337354 FAM83CQ9BQN1 747 aa16■□□□□ 0.15
SEC13-201ENST00000337354 BRD9Q9H8M2 597 aa16■□□□□ 0.15
SEC13-201ENST00000337354 SLC2A4RGQ9NR83 387 aa16■□□□□ 0.15
SEC13-201ENST00000337354 DUS2Q9NX74 493 aaKnown RBP16■□□□□ 0.15
SEC13-201ENST00000337354 UVRAGQ9P2Y5 699 aa16■□□□□ 0.15
SEC13-201ENST00000337354 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
SEC13-201ENST00000337354 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
SEC13-201ENST00000337354 PCDHA13Q9Y5I0 950 aa16■□□□□ 0.15
SEC13-201ENST00000337354 PATJQ8NI35 1801 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ARHGAP6O43182 974 aa16■□□□□ 0.15
SEC13-201ENST00000337354 MSI1O43347 362 aaKnown RBP16■□□□□ 0.15
SEC13-201ENST00000337354 HMBSP08397 361 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ALADP13716 330 aa16■□□□□ 0.15
SEC13-201ENST00000337354 GDI1P31150 447 aa16■□□□□ 0.15
SEC13-201ENST00000337354 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
SEC13-201ENST00000337354 CHKAP35790 457 aa16■□□□□ 0.15
SEC13-201ENST00000337354 IFNAR2P48551 515 aa16■□□□□ 0.15
SEC13-201ENST00000337354 RPL7AP62424 266 aaKnown RBP16■□□□□ 0.15
SEC13-201ENST00000337354 DEUP1Q05D60 604 aa16■□□□□ 0.15
SEC13-201ENST00000337354 NME3Q13232 169 aa16■□□□□ 0.15
SEC13-201ENST00000337354 GRM2Q14416 872 aa16■□□□□ 0.15
SEC13-201ENST00000337354 PPP2R5DQ14738 602 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ACAP1Q15027 740 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ACBD5Q5T8D3 534 aaPredicted RBP16■□□□□ 0.15
SEC13-201ENST00000337354 TRNP1Q6NT89 227 aa16■□□□□ 0.15
SEC13-201ENST00000337354 RAD9BQ6WBX8 426 aa16■□□□□ 0.15
SEC13-201ENST00000337354 Q6ZNB5 142 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ADGRG2Q8IZP9 1017 aa16■□□□□ 0.15
SEC13-201ENST00000337354 TXLNBQ8N3L3 684 aa16■□□□□ 0.15
SEC13-201ENST00000337354 TTC16Q8NEE8 873 aa16■□□□□ 0.15
SEC13-201ENST00000337354 RIN3Q8TB24 985 aa16■□□□□ 0.15
SEC13-201ENST00000337354 ADAM32Q8TC27 787 aa16■□□□□ 0.15
SEC13-201ENST00000337354 DNASE1L2Q92874 299 aa16■□□□□ 0.15
SEC13-201ENST00000337354 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
SEC13-201ENST00000337354 CNPY3Q9BT09 278 aa16■□□□□ 0.15
SEC13-201ENST00000337354 EPHX3Q9H6B9 360 aa16■□□□□ 0.15
SEC13-201ENST00000337354 WDCPQ9H6R7 721 aa16■□□□□ 0.15
SEC13-201ENST00000337354 STOML2Q9UJZ1 356 aa16■□□□□ 0.15
SEC13-201ENST00000337354 DUSP12Q9UNI6 340 aa16■□□□□ 0.15
SEC13-201ENST00000337354 MYO10Q9HD67 2058 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 GREB1Q4ZG55 1949 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 GJB6O95452 261 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 APOEP02649 317 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 KLKB1P03952 638 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 IRF1P10914 325 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 CORO1AP31146 461 aaKnown RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 SLC11A2P49281 568 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 CXCR3P49682 368 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 MLLT6P55198 1093 aaPredicted RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 PITX1P78337 314 aaPredicted RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 TCEAL1Q15170 157 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 BRMS1LQ5PSV4 323 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 RHOT2Q8IXI1 618 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 ATP2A3Q93084 1043 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 RNF34Q969K3 372 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 FCRL2Q96LA5 508 aaPredicted RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 TBCBQ99426 244 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
SEC13-201ENST00000337354 IRX2Q9BZI1 471 aaPredicted RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 AGO1Q9UL18 857 aaKnown RBP15.99■□□□□ 0.15
SEC13-201ENST00000337354 KCNU1A8MYU2 1149 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 MYO1FO00160 1098 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 NFATC1O95644 943 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 ATP11AP98196 1134 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 NR1H3Q13133 447 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 PIGHQ14442 188 aaPredicted RBP15.98■□□□□ 0.15
SEC13-201ENST00000337354 ZC3H12AQ5D1E8 599 aaKnown RBP15.98■□□□□ 0.15
SEC13-201ENST00000337354 DENND1CQ8IV53 801 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 BBS7Q8IWZ6 715 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 ATP6V0D2Q8N8Y2 350 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 ARHGEF26Q96DR7 871 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 BTN2A3PQ96KV6 586 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 DDX50Q9BQ39 737 aaKnown RBP15.98■□□□□ 0.15
SEC13-201ENST00000337354 NUP85Q9BW27 656 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 LINC00597Q9H2U6 94 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 PIGVQ9NUD9 493 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 CTTNBP2NLQ9P2B4 639 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 WNT6Q9Y6F9 365 aa15.98■□□□□ 0.15
SEC13-201ENST00000337354 SYNJ2BP-COX16A0A087WUM0 186 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 FAM86C2PA6NEL3 165 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 PI4K2BG5E9Z4 385 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 ARNTLO00327 626 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 RNF8O76064 485 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 GLULP15104 373 aa15.97■□□□□ 0.15
SEC13-201ENST00000337354 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
SEC13-201ENST00000337354 PSMA2P25787 234 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms