RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 PPM1JQ5JR12 505 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 FAM102AQ5T9C2 384 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 CES3Q6UWW8 571 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 UNC5AQ6ZN44 842 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 FRMD7Q6ZUT3 714 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 THNSL1Q8IYQ7 743 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 USP13Q92995 863 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 CPXM1Q96SM3 734 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ZNF358Q9NW07 568 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 USP18Q9UMW8 372 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 SDR42E2A6NKP2 422 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 APOC4-APOC2K7ER74 178 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 MYCP01106 439 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 APOC2P02655 101 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PABPC4LP0CB38 370 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 ADORA2AP29274 412 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PKNOX1P55347 436 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 KRT76Q01546 638 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 BAATQ14032 418 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 NADK2Q4G0N4 442 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PDPK2PQ6A1A2 396 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 LCA5Q86VQ0 697 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 OXCT2Q9BYC2 517 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 LIN28AQ9H9Z2 209 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 GPAMQ9HCL2 828 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 NGRNQ9NPE2 291 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 CYP26B1Q9NR63 512 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 FEM1BQ9UK73 627 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PHF24Q9UPV7 400 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 MRPL42Q9Y6G3 142 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 NDC80O14777 642 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ALDH1A3P47895 512 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ANKRD20A4Q4UJ75 823 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 C6orf52Q5T4I8 152 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PTAR1Q7Z6K3 402 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 FAM160B2Q86V87 743 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ADGRF2Q8IZF7 708 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 TNS4Q8IZW8 715 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PIWIL2Q8TC59 973 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 PPP4R1Q8TF05 950 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 PDCD2LQ9BRP1 358 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 CEP41Q9BYV8 373 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 COPS7BQ9H9Q2 264 aaPredicted RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 SIRPGQ9P1W8 387 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 FETUBQ9UGM5 382 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 COL24A1Q17RW2 1714 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 NFASCO94856 1347 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 DGAT1O75907 488 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 LYPLA2O95372 231 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 SESN2P58004 480 aaPredicted RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 EMC2Q15006 297 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 PDK1Q15118 436 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ZNF699Q32M78 642 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 STRIP1Q5VSL9 837 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 KLHDC10Q6PID8 442 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 TMC7Q7Z402 723 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 C10orf107Q8IVU9 208 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ATP6V0A1Q93050 837 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 CLMNQ96JQ2 1002 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 HAPLN3Q96S86 360 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 MIS12Q9H081 205 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 THAP1Q9NVV9 213 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 DOLKQ9UPQ8 538 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 A0A1B0GTW7 788 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 APOEP02649 317 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 HMGCRP04035 888 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ERBB2P04626 1255 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 SRGAP2CP0DJJ0 459 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ITGA9Q13797 1035 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 KCNJ11Q14654 390 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 PABPC1LQ4VXU2 614 aaKnown RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 MCPH1Q8NEM0 835 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 KIF12Q96FN5 646 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 DCUN1D1Q96GG9 259 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 PEBP4Q96S96 227 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 CGRRF1Q99675 332 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ADPGKQ9BRR6 497 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 MRPL1Q9BYD6 325 aaKnown RBP8.13□□□□□ -1.11
VMA21-201ENST00000330374 POPDC2Q9HBU9 364 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 UBAP1Q9NZ09 502 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 HNRNPCP07910 306 aaKnown RBP eCLIP8.13□□□□□ -1.114e-7■■□□□ 12.9
VMA21-201ENST00000330374 ITGAXP20702 1163 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 RGS7P49802 495 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 NUDT2P50583 147 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 MARK4Q96L34 752 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 LRGUKQ96M69 825 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 ARHGAP28Q9P2N2 729 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 STRCQ7RTU9 1775 aa8.13□□□□□ -1.11
VMA21-201ENST00000330374 HMX2A2RU54 273 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TPP1O14773 563 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 KLF11O14901 512 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 XPO1O14980 1071 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 SRGAP2BP0DMP2 458 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms