RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 GTF2IRD1Q9UHL9 959 aa9.6□□□□□ -0.87
BDNF-201ENST00000314915 N4BP2Q86UW6 1770 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 ARHGAP42A6NI28 874 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 SLITRK5O94991 958 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 POP4O95707 220 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 BCL10O95999 233 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 HPGDP15428 266 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PTPREP23469 700 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 TOP3AQ13472 1001 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 RBM20Q5T481 1227 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 GALNT18Q6P9A2 607 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 LRRC47Q8N1G4 583 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 MARC2Q969Z3 335 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 TRIM31Q9BZY9 425 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 RPF2Q9H7B2 306 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 DNAJC17Q9NVM6 304 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ARHGAP20Q9P2F6 1191 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PCOLCE2Q9UKZ9 415 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 CORINQ9Y5Q5 1042 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 DAB1O75553 588 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 CLPXO76031 633 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ACTN1P12814 892 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 HPCAL1P37235 193 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 FUT11Q495W5 492 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ARHGEF16Q5VV41 709 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 GGT6Q6P531 493 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 LINC00299Q6ZSB3 139 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 RHOUQ7L0Q8 258 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 LIMS2Q7Z4I7 341 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 TWNKQ96RR1 684 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 TRPM5Q9NZQ8 1165 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ZNF229Q9UJW7 825 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 SMG5Q9UPR3 1016 aaKnown RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 ZNF532Q9HCE3 1301 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PIGNO95427 931 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 GNRH1P01148 92 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 MCF2P10911 925 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 STMN1P16949 149 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 CDH5P33151 784 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 SERPINB5P36952 375 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ZAP70P43403 619 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 RAB14P61106 215 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 TBCCQ15814 346 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PGS1Q32NB8 556 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PERM1Q5SV97 790 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ARMC8Q8IUR7 673 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 SLC44A2Q8IWA5 706 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PYDC1Q8WXC3 89 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 ACAD9Q9H845 621 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 HOMER2Q9NSB8 354 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 PARVAQ9NVD7 372 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ARMCX3Q9UH62 379 aaPredicted RBP9.59□□□□□ -0.87
BDNF-201ENST00000314915 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
BDNF-201ENST00000314915 ERVH48-1M5A8F1 160 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 TAF5LO75529 589 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 KRT37O76014 449 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 SNAPINO95295 136 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 NPR1P16066 1061 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 F8A1P23610 371 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 NUBP1P53384 320 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 KIAA1755Q5JYT7 1200 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 PLEKHM3Q6ZWE6 761 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 CEP68Q76N32 757 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 GRAMD1CQ8IYS0 662 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 SIX6OS1Q8N1H7 587 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 FATE1Q969F0 183 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 TEX13BQ9BXU2 312 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 C1orf21Q9H246 121 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 DDX28Q9NUL7 540 aaKnown RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 PKD2L2Q9NZM6 624 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 LAMP5Q9UJQ1 280 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 PTBP2Q9UKA9 531 aaKnown RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 RIPK3Q9Y572 518 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 ABCB11O95342 1321 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 LRRC53A6NM62 1247 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 DYNC1LI2O43237 492 aaPredicted RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 GREM1O60565 184 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 CCNKO75909 580 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 TTLL1O95922 423 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 AP1S2P56377 157 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 GNA12Q03113 381 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 CENPCQ03188 943 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 VWA5B1Q5TIE3 1220 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 CADM2Q8N3J6 435 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 GOT1L1Q8NHS2 421 aaPredicted RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 MCRS1Q96EZ8 462 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 VPS54Q9P1Q0 977 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 CPNE7Q9UBL6 633 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
BDNF-201ENST00000314915 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
BDNF-201ENST00000314915 TRPM2O94759 1503 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms