RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 PGM2Q96G03 612 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 YME1L1Q96TA2 773 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 SLC39A10Q9ULF5 831 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 STXBP5LQ9Y2K9 1186 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 SPECC1L-ADORA2AF8WAN1 911 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 MATKP42679 507 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 TUBP50607 506 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 LRRN4Q8WUT4 740 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 MRPL9Q9BYD2 267 aaKnown RBP14.09□□□□□ -0.15
PAAF1-201ENST00000310571 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 MANSC1Q9H8J5 431 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 CYP4F11Q9HBI6 524 aa14.09□□□□□ -0.15
PAAF1-201ENST00000310571 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.15
PAAF1-201ENST00000310571 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 OPHN1O60890 802 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 NFKBIAP25963 317 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 RAD51Q06609 339 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 SERPINB11Q96P15 392 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 DPEP3Q9H4B8 488 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 USH1CQ9Y6N9 552 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TXNDC9O14530 226 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 FKTNO75072 461 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ZNF177Q13360 481 aaPredicted RBP14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TUSC3Q13454 348 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 SLC45A4Q5BKX6 768 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TAPT1Q6NXT6 567 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ACAD11Q709F0 780 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TMEM39AQ9NV64 488 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 RBM22Q9NW64 420 aaKnown RBP eCLIP14.08□□□□□ -0.16
PAAF1-201ENST00000310571 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 OR12D3Q9UGF7 316 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 CFLARO15519 480 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TWF1Q12792 350 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 SLC12A1Q13621 1099 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 FAM187BQ17R55 369 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 PTPRJQ12913 1337 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ZBTB24O43167 697 aaPredicted RBP14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TOMM70O94826 608 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 GOT1P17174 413 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 CCL23P55773 120 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TTC27Q6P3X3 843 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 DCLRE1AQ6PJP8 1040 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 FRA10AC1Q70Z53 315 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TRPM8Q7Z2W7 1104 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 FNIP1Q8TF40 1166 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 GIPC2Q8TF65 315 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ZNF670Q9BS34 389 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 ABCC13Q9NSE7 274 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 CTNNAL1Q9UBT7 734 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
PAAF1-201ENST00000310571 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
PAAF1-201ENST00000310571 DDX60LQ5H9U9 1706 aaKnown RBP14.07□□□□□ -0.16
PAAF1-201ENST00000310571 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 SNX2O60749 519 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 LRG1P02750 347 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-201ENST00000310571 LILRA4P59901 499 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 ART3Q13508 389 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 BMPR2Q13873 1038 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 LAMB1P07942 1786 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 FSCBQ5H9T9 825 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CINPQ9BW66 212 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-201ENST00000310571 MTIF3Q9H2K0 278 aaKnown RBP14.07□□□□□ -0.16
PAAF1-201ENST00000310571 ETNK2Q9NVF9 386 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 H0Y626 953 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CNMDO75829 334 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CHEK2O96017 543 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 CLCNKBP51801 687 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 TMEM63BQ5T3F8 832 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 NDRG1Q92597 394 aaKnown RBP14.07□□□□□ -0.16
PAAF1-201ENST00000310571 FICDQ9BVA6 458 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 NFKBIZQ9BYH8 718 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 NT5MQ9NPB1 228 aa14.07□□□□□ -0.16
PAAF1-201ENST00000310571 OCRLQ01968 901 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 CHI3L2Q15782 390 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 STRA6Q9BX79 667 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 PCDH18Q9HCL0 1135 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 VANGL2Q9ULK5 521 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 FANCGO15287 622 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 RABGAP1LQ5R372 815 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 C1orf220Q5T0J3 134 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 UNC45BQ8IWX7 931 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 IQCKQ8N0W5 287 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 CLGNO14967 610 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 LMO2P25791 158 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 MGAT1P26572 445 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
PAAF1-201ENST00000310571 PTP4A2Q12974 167 aa14.06□□□□□ -0.16
PAAF1-201ENST00000310571 BTG3Q14201 252 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms