RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 FAM228AQ86W67 206 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SNX32Q86XE0 403 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 ZSWIM2Q8NEG5 633 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RXFP2Q8WXD0 754 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SLCO2A1Q92959 643 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 WNT8BQ93098 351 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 FAF2Q96CS3 445 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 GAD1Q99259 594 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RBM12Q9NTZ6 932 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TJP2Q9UDY2 1190 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 POLIQ9UNA4 740 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 STMND1H3BQB6 276 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TMEM189-UBE2V1I3L0A0 370 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 PIRO00625 290 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 DIAPH2O60879 1101 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SRGAP2O75044 1071 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 PDGFRBP09619 1106 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CCR1P32246 355 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MATKP42679 507 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MSH2P43246 934 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MAGEA11P43364 429 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 IL9RQ01113 521 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 DRP2Q13474 957 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 UGP2Q16851 508 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 PREPLQ4J6C6 727 aaPredicted RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MDH1BQ5I0G3 518 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 IZUMO3Q5VZ72 239 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 NUGGCQ68CJ6 796 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TPGS2Q68CL5 300 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 BBS12Q6ZW61 710 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 GPR65Q8IYL9 337 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 KLHDC9Q8NEP7 349 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SUN5Q8TC36 379 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TRIB2Q92519 343 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RNF25Q96BH1 459 aaPredicted RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MCRS1Q96EZ8 462 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SUSD3Q96L08 255 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TOX2Q96NM4 488 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 PACSIN1Q9BY11 444 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 IRX2Q9BZI1 471 aaPredicted RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CCDC68Q9H2F9 335 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SMYD3Q9H7B4 428 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 BFARQ9NZS9 450 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 KLK14Q9P0G3 267 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TRIM10Q9UDY6 481 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 A0A0G2JMZ2 1700 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SRRM3A6NNA2 597 aaPredicted RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 OPHN1O60890 802 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TTC4O95801 387 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 ITGAVP06756 1048 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CAPN1P07384 714 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CSH1P0DML2 217 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CSH2P0DML3 217 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RARGP13631 454 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RAG1P15918 1043 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 ACO1P21399 889 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CD52P31358 61 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 HARS2P49590 506 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TKTL1P51854 596 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SEZ6Q53EL9 994 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CCNYQ8ND76 341 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 FAM172AQ8WUF8 416 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TFB1MQ8WVM0 346 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 OVCA2Q8WZ82 227 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 LRRC1Q9BTT6 524 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 DDX47Q9H0S4 455 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 WDCPQ9H6R7 721 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 FAM49BQ9NUQ9 324 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 NFU1Q9UMS0 254 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SMG5Q9UPR3 1016 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 AAR2Q9Y312 384 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 LTFP02788 710 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 KRT15P19012 456 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 HADHAP40939 763 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RENBPP51606 427 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SLC12A2P55011 1212 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CCL14Q16627 93 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 HIF1AQ16665 826 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 NAPEPLDQ6IQ20 393 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 NEK5Q6P3R8 708 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SLC43A3Q8NBI5 491 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 UBA3Q8TBC4 463 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SAMD11Q96NU1 681 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SERPINB12Q96P63 405 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 SLC4A5Q9BY07 1137 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 NXF3Q9H4D5 531 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 ACTR5Q9H9F9 607 aaPredicted RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 ASB3Q9Y575 518 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 I3L4J1 428 aa6.19□□□□□ -1.42
SEC22A-201ENST00000309934 RNF40O75150 1001 aa6.19□□□□□ -1.42
SEC22A-201ENST00000309934 HSPA8P11142 646 aaKnown RBP6.19□□□□□ -1.42
SEC22A-201ENST00000309934 HOXB8P17481 243 aaPredicted RBP6.19□□□□□ -1.42
SEC22A-201ENST00000309934 PFKLP17858 780 aa6.19□□□□□ -1.42
SEC22A-201ENST00000309934 S100A1P23297 94 aa6.19□□□□□ -1.42
SEC22A-201ENST00000309934 AKAP5P24588 427 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms