RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 EPAS1Q99814 870 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 RGS17Q9UGC6 210 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 TUBGCP4Q9UGJ1 667 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MED7O43513 233 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 RAB27AP51159 221 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 FAM136AQ96C01 138 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 V9GYQ6 96 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ASMTLO95671 621 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 OSBPP22059 807 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ARL2P36404 184 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ZNF618Q5T7W0 954 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 CHST13Q8NET6 341 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 SNX25Q9H3E2 840 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 XAB2Q9HCS7 855 aaKnown RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 DOCK5Q9H7D0 1870 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 PSTPIP1O43586 416 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 TMEM63AO94886 807 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 STBD1O95210 358 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 P4HA1P13674 534 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 FGFR3P22607 806 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 ARPP19P56211 112 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MRPS22P82650 360 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 FOXD4Q12950 439 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 NRF1Q16656 503 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 DPY19L2Q6NUT2 758 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 EDEM1Q92611 657 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 CCT7Q99832 543 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MAFBQ9Y5Q3 323 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 EVPLQ92817 2033 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 NHSQ6T4R5 1651 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MKI67P46013 3256 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 C2CD2LO14523 706 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 HNRNPCL1O60812 293 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 KRT7P08729 469 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 PIGHQ14442 188 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 HABP4Q5JVS0 413 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 SPDYCQ5MJ68 293 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 IFNEQ86WN2 208 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 IL1RL2Q9HB29 575 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 AURKCQ9UQB9 309 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MAFO75444 373 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 LGALS2P05162 132 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 KDELR1P24390 212 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 GLRBP48167 497 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 RTP1P59025 263 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 ESRRGP62508 458 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MORF4L2Q15014 288 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 OASLQ15646 514 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 ALKBH8Q96BT7 664 aaKnown RBP13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 FBXL18Q96ME1 805 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 TAGLN3Q9UI15 199 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
RETREG3-201ENST00000309428 MYH9P35579 1960 aaKnown RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RNF103-CHMP3A0A140T963 221 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 GIPC1O14908 333 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PLA2G6O60733 806 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CYP1A1P04798 512 aaPredicted RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 TPH1P17752 444 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 GALK1P51570 392 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 GBE1Q04446 702 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 POU5F1BQ06416 359 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms