RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RPS6P62753 249 aaKnown RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 VPS72Q15906 364 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 C7orf31Q8N865 590 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 OR5B17Q8NGF7 314 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 GIPC3Q8TF64 312 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 EFCAB1Q9HAE3 211 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 A0A088AWK7 358 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 TTLL13PA6NNM8 815 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 H3BSA7 217 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 BIRC5O15392 142 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 ADCY6O43306 1168 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 ME2P23368 584 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 ITPRIPL1Q6GPH6 555 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 C10orf107Q8IVU9 208 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 TDRD5Q8NAT2 981 aaKnown RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 APBB2Q92870 758 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 DDX43Q9NXZ2 648 aaKnown RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 DOLKQ9UPQ8 538 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 TSC22D4Q9Y3Q8 395 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CSADQ9Y600 493 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 ASTN2O75129 1339 aaPredicted RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CHADO15335 359 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 HSPA8P11142 646 aaKnown RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 PRPSAP1Q14558 356 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 EMC2Q15006 297 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 ZFP1Q6P2D0 407 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 FAM149B1Q96BN6 582 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CGRRF1Q99675 332 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 MYRFQ9Y2G1 1151 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 WDR27A2RRH5 827 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 SORBS2O94875 1100 aaKnown RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CRTAMO95727 393 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 GPD1P21695 349 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
TRIM35-201ENST00000305364 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 RPS6KA2Q15349 733 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CRYGNQ8WXF5 182 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 BSNDQ8WZ55 320 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 CIDEBQ9UHD4 219 aa13.42□□□□□ -0.26
TRIM35-201ENST00000305364 PMM2O15305 246 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ITM2AO43736 263 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ATP9BO43861 1147 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 LRCH4O75427 683 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 RAP1GAPP47736 663 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ACTR2P61160 394 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ABCE1P61221 599 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 YWHAZP63104 245 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CES3Q6UWW8 571 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CDR2LQ86X02 465 aaPredicted RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TNS4Q8IZW8 715 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 PDCD6IPQ8WUM4 868 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 SPDYE16A6NNV3 312 aaPredicted RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 KLF11O14901 512 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TAF5Q15542 800 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TRMT10BQ6PF06 316 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 ZDHHC15Q96MV8 337 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 PLEKHG4BQ96PX9 1271 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 APOBEC3GQ9HC16 384 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 WARS2Q9UGM6 360 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CRHR1P34998 444 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CCR3P51677 355 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 OGDHQ02218 1023 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 KLF10Q13118 480 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 UNC5AQ6ZN44 842 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 RBM12BQ8IXT5 1001 aaKnown RBP13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CXorf38Q8TB03 319 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 C1orf21Q9H246 121 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CDYLQ9Y232 598 aa13.41□□□□□ -0.26
TRIM35-201ENST00000305364 CSH1P0DML2 217 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 CSH2P0DML3 217 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MYL4P12829 197 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 NAA20P61599 178 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MRPS9P82933 396 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SEL1L3Q68CR1 1132 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 DIS3LQ8TF46 1054 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 NRBP2Q9NSY0 501 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 CNTNAP2Q9UHC6 1331 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 HMGCRP04035 888 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms