RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ARL4CP56559 192 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 GBE1Q04446 702 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 HIF1AQ16665 826 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 DDR2Q16832 855 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 PM20D1Q6GTS8 502 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 VSTM1Q6UX27 236 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 CCNYQ8ND76 341 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 PRDM5Q9NQX1 630 aaPredicted RBP15.03■□□□□ -0
SHCBP1-201ENST00000303383 HCSTQ9UBK5 93 aa15.03■□□□□ -0
SHCBP1-201ENST00000303383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 STK10O94804 968 aaKnown RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 HP1BP3Q5SSJ5 553 aaPredicted RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 C6orf118Q5T5N4 469 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 RNASEH2BQ5TBB1 312 aaKnown RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 SDHAF4Q5VUM1 108 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 KIAA1841Q6NSI8 718 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 EPAS1Q99814 870 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 TKTL2Q9H0I9 626 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 ADAM7Q9H2U9 754 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 AAASQ9NRG9 546 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 WBP1LQ9NX94 342 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 MTMR10Q9NXD2 777 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 TTC3P53804 2025 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 IVLP07476 585 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 PDIA2Q13087 525 aaKnown RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 MGAT5BQ3V5L5 792 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 ZBED8Q8IZ13 594 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 SEPT5Q99719 369 aaPredicted RBP15.02■□□□□ -0
SHCBP1-201ENST00000303383 TMEM175Q9BSA9 504 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 KLC2Q9H0B6 622 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 FBXO44Q9H4M3 255 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 VPS37BQ9H9H4 285 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 PRDM16Q9HAZ2 1276 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
SHCBP1-201ENST00000303383 SMAPO00193 183 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 GALTP07902 379 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 AGBL2Q5U5Z8 902 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 OTUD1Q5VV17 481 aaPredicted RBP15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 KCNT2Q6UVM3 1135 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 CAPN12Q6ZSI9 719 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 PDIK1LQ8N165 341 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 NUP93Q8N1F7 819 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 ATAD1Q8NBU5 361 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 DIS3LQ8TF46 1054 aaKnown RBP15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 LRRN4Q8WUT4 740 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 NTAN1Q96AB6 310 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 TTC25Q96NG3 672 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 ARHGEF4Q9NR80 690 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 XPO7Q9UIA9 1087 aaKnown RBP15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 FBXW11Q9UKB1 542 aa15.02□□□□□ -0.01
SHCBP1-201ENST00000303383 E7EVH7 732 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TP73O15350 636 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 FAM117BQ6P1L5 589 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TAC4Q86UU9 113 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 DQX1Q8TE96 717 aaKnown RBP15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TFB1MQ8WVM0 346 aaKnown RBP15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 NINJ2Q9NZG7 142 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 BCLAF3A2AJT9 711 aaKnown RBP15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 CXCL10P02778 98 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 NRLP54845 237 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 AP1B1Q10567 949 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 XRCC4Q13426 336 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 SLC45A4Q5BKX6 768 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 CNKSR3Q6P9H4 555 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 PPP1R21Q6ZMI0 780 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 ARHGEF18Q6ZSZ5 1173 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 RFX8Q6ZV50 586 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 ANKS3Q6ZW76 656 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TTPALQ9BTX7 342 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 SIK2Q9H0K1 926 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 SEPT10Q9P0V9 454 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 USP3Q9Y6I4 520 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 BBS9Q3SYG4 887 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 SYCP2LQ5T4T6 812 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 NCBP2-AS2Q69YL0 99 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 LEKR1Q6ZMV7 388 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 SCML4Q8N228 414 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 CPT1BQ92523 772 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 PRCCQ92733 491 aaPredicted RBP15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 EPB41L4BQ9H329 900 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 TSC2P49815 1807 aa15.01□□□□□ -0.01
SHCBP1-201ENST00000303383 KIAA0100Q14667 2235 aaKnown RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 PPP1R12AO14974 1030 aaPredicted RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 CLTBP09497 229 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 MAGOHP61326 146 aaKnown RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.014e-16■■■■■ 53.1
SHCBP1-201ENST00000303383 EPS8L3Q8TE67 593 aaKnown RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 PYROXD1Q8WU10 500 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 PGAP3Q96FM1 320 aaPredicted RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 CAPS2Q9BXY5 557 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 ETNK2Q9NVF9 386 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 DTLQ9NZJ0 730 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 SCN5AQ14524 2016 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 PDK1Q15118 436 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 LONRF1Q17RB8 773 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 RWDD4Q6NW29 188 aaKnown RBP15□□□□□ -0.01
SHCBP1-201ENST00000303383 VPS52Q8N1B4 723 aa15□□□□□ -0.01
SHCBP1-201ENST00000303383 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms