RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NAIF1Q69YI7 327 aaPredicted RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ERICH1Q86X53 443 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ZNF677Q86XU0 584 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 EGFP01133 1207 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 KLKB1P03952 638 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 CHKAP35790 457 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 UBASH3AP57075 661 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 MTAPQ13126 283 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 CCINQ13939 588 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 EPS8L1Q8TE68 723 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 PNKPQ96T60 521 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 CHRDQ9H2X0 955 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 WDR35Q9P2L0 1181 aa12.6□□□□□ -0.39
HMGB2-201ENST00000296503 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
HMGB2-201ENST00000296503 MSI1O43347 362 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 ZRANB2O95218 330 aaKnown RBP eCLIP12.59□□□□□ -0.391e-7■■■■■ 30.6
HMGB2-201ENST00000296503 ERBB2P04626 1255 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 FYNP06241 537 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 OPRD1P41143 372 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 TBX4P57082 545 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 TAF5Q15542 800 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 TRIP4Q15650 581 aaPredicted RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 SYPL2Q5VXT5 272 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 MSANTD2Q6P1R3 559 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 Q6ZNB5 142 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 C18orf8Q96DM3 657 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 NEDD8-MDP1E9PL57 170 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 GRAP2O75791 330 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CDR2Q01850 454 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 SLC6A3Q01959 620 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CSTF1Q05048 431 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 Q6ZS52 159 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 UNC45BQ8IWX7 931 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 ADAM32Q8TC27 787 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 BHMTQ93088 406 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 XPO6Q96QU8 1125 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 ARGLU1Q9NWB6 273 aaPredicted RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 DEC1Q9P2X7 70 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 NOCTQ9UK39 431 aaKnown RBP12.59□□□□□ -0.39
HMGB2-201ENST00000296503 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
HMGB2-201ENST00000296503 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
HMGB2-201ENST00000296503 RNF40O75150 1001 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
HMGB2-201ENST00000296503 CYBBP04839 570 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 APODP05090 189 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 GLI1P08151 1106 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 TYRP14679 529 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 FERP16591 822 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 CHRNB2P17787 502 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 CXCL12P48061 93 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
HMGB2-201ENST00000296503 GAS6Q14393 721 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 C12orf40Q86WS4 652 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 DEFB106AQ8N104 65 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 SPEM1Q8N4L4 309 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
HMGB2-201ENST00000296503 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 ASNSD1Q9NWL6 643 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 PLK2Q9NYY3 685 aa12.58□□□□□ -0.4
HMGB2-201ENST00000296503 TBC1D3BA6NDS4 549 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 HOXC11O43248 304 aaPredicted RBP12.57□□□□□ -0.4
HMGB2-201ENST00000296503 NRDCO43847 1150 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 HSF2BPO75031 334 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 ATG13O75143 517 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 TULP3O75386 442 aa12.57□□□□□ -0.4
HMGB2-201ENST00000296503 EIF2DP41214 584 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms