RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 BIRC5O15392 142 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 GRAP2O75791 330 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 SFSWAPQ12872 951 aaKnown RBP10.59□□□□□ -0.71
LMX1A-201ENST00000294816 C16orf72Q14CZ0 275 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 KCTD21Q4G0X4 260 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 LPCAT2Q7L5N7 544 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 ARCQ7LC44 396 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 MAVSQ7Z434 540 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 PTAR1Q7Z6K3 402 aaPredicted RBP10.59□□□□□ -0.71
LMX1A-201ENST00000294816 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 WDTC1Q8N5D0 677 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 SAMD3Q8N6K7 520 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 RAVER2Q9HCJ3 691 aaKnown RBP10.59□□□□□ -0.71
LMX1A-201ENST00000294816 USP18Q9UMW8 372 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 TELO2Q9Y4R8 837 aa10.59□□□□□ -0.71
LMX1A-201ENST00000294816 ADAMTSL1Q8N6G6 1762 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 K7ERI5 159 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 TPP1O14773 563 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 CHADO15335 359 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 LYPLA2O95372 231 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SERPINE1P05121 402 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FGF3P11487 239 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 CCR3P51677 355 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 JAK3P52333 1124 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 CDKL1Q00532 357 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FSCBQ5H9T9 825 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 MBLAC2Q68D91 279 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 NXNQ6DKJ4 435 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 BHLHE22Q8NFJ8 381 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 ZSCAN18Q8TBC5 510 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 ADAM32Q8TC27 787 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 DDI1Q8WTU0 396 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 TMIGD2Q96BF3 282 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 DCUN1D5Q9BTE7 237 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 GLIS2Q9BZE0 524 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 MTMR12Q9C0I1 747 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SENP6Q9GZR1 1112 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SEMA6AQ9H2E6 1030 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 C6orf203Q9P0P8 240 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF180Q9UJW8 692 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF189O75820 626 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 KRT19P08727 400 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 CD1EP15812 388 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 XRCC1P18887 633 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FUT4P22083 530 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FGFR3P22607 806 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 GRIA1P42261 906 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 STT3AP46977 705 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 RAP1GAPP47736 663 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 NR1H2P55055 460 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 KLF10Q13118 480 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 RAB6CQ53S08 254 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 PPM1JQ5JR12 505 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 PPM1LQ5SGD2 360 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SP8Q8IXZ3 490 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 LENG8Q96PV6 779 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SERPINI1Q99574 410 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FRMD8P1Q9BZ68 369 aaPredicted RBP10.58□□□□□ -0.72
LMX1A-201ENST00000294816 RAB6CQ9H0N0 254 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 TXNDC16Q9P2K2 825 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 FBXO40Q9UH90 709 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SSX2IPQ9Y2D8 614 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
LMX1A-201ENST00000294816 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 CASQ2O14958 399 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 DENRO43583 198 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ZBTB14O43829 449 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 STAMBPO95630 424 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 RALBP11234 206 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 PSMC3P17980 439 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 MTTPP55157 894 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 FAM102AQ5T9C2 384 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 KRT80Q6KB66 452 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 CAND1Q86VP6 1230 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 NLRP7Q8WX94 980 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 EME1Q96AY2 570 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 CGRRF1Q99675 332 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 OXCT2Q9BYC2 517 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 RSAD1Q9HA92 442 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF358Q9NW07 568 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 UBIAD1Q9Y5Z9 338 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 COL14A1Q05707 1796 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 HMX2A2RU54 273 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TRDMT1O14717 391 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 FOXD2O60548 495 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 LSM8O95777 96 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 F7P08709 466 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 FAM163BP0C2L3 166 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 GABRB2P47870 512 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 THOP1P52888 689 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 BCAR1P56945 870 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 OSTNP61366 133 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms