RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PDIK1LQ8N165 341 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 RIBC1Q8N443 379 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 PQLC3Q8N755 202 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 NAT8LQ8N9F0 302 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 HASPINQ8TF76 798 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ARHGEF2Q92974 986 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 CENPTQ96BT3 561 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 FUBP3Q96I24 572 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDPN-201ENST00000294489 OXCT2Q9BYC2 517 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 ULBP1Q9BZM6 244 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 PAK5Q9P286 719 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 RCOR3Q9P2K3 495 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 ADAM28Q9UKQ2 775 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 GOLGA8MH3BSY2 632 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 EBAG9O00559 213 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 CAPN9O14815 690 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 NR2C2P49116 596 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 TSPY1Q01534 308 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 SCAPQ12770 1279 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 CNKSR3Q6P9H4 555 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 C4orf50Q6ZRC1 276 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 HFE2Q6ZVN8 426 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 SCLYQ96I15 445 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 COLEC11Q9BWP8 271 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 RHOBTB2Q9BYZ6 727 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 IL37Q9NZH6 218 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 EXOC1LA0A1B0GW35 172 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 GMNCA6NCL1 334 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 E7ENQ6 273 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 KCNN4O15554 427 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 IGLV3-25P01717 112 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 PHBP35232 272 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 MAGEA11P43364 429 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 OR1G1P47890 313 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 CCT5P48643 541 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 SLC11A1P49279 550 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 GATMP50440 423 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 PPP1R21Q6ZMI0 780 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 BZW1Q7L1Q6 419 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 NLRP14Q86W24 1093 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 FAM131BQ86XD5 332 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 CDKL3Q8IVW4 592 aaPredicted RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 DIS3LQ8TF46 1054 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 PYROXD1Q8WU10 500 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 NDRG1Q92597 394 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 NTAN1Q96AB6 310 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
PDPN-201ENST00000294489 INTS9Q9NV88 658 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 XPO7Q9UIA9 1087 aaKnown RBP9.48□□□□□ -0.89
PDPN-201ENST00000294489 OR6C75A6NL08 312 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 FAM107AO95990 144 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CHN1P15882 459 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 BDNFP23560 247 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 SEC24CP53992 1094 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 PPARDQ03181 441 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 SYPL2Q5VXT5 272 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 C4orf22Q6V702 233 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 EXOC3L1Q86VI1 746 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 DCP1BQ8IZD4 617 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 TAB3Q8N5C8 712 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CCDC185Q8N715 623 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 MDM1Q8TC05 714 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 RTP4Q96DX8 246 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 C8orf48Q96LL4 319 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 FAM193BQ96PV7 902 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CSPG4P5Q96PW8 444 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 WDR6Q9NNW5 1121 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 LGALS13Q9UHV8 139 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 M0QYT0 321 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 DGKIO75912 1065 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 GALTP07902 379 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ATP2A2P16615 1042 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CYP2C18P33260 490 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 RNASELQ05823 741 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 DEUP1Q05D60 604 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 XRCC4Q13426 336 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 FASTKD3Q14CZ7 662 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CCDC38Q502W7 563 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 HP1BP3Q5SSJ5 553 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 ANKRD22Q5VYY1 191 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 B4GALNT4Q76KP1 1039 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ZNF689Q96CS4 500 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 KCTD15Q96SI1 283 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 KLC2Q9H0B6 622 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 CWH43Q9H720 699 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 RC3H2Q9HBD1 1191 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 USP29Q9HBJ7 922 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms