RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PSMD5Q16401 504 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 LGSNQ5TDP6 509 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 C3orf62Q6ZUJ4 267 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ALLCQ8N6M5 410 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 CMASQ8NFW8 434 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 OR10T2Q8NGX3 314 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 BCAS4Q8TDM0 211 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 LBHD1Q9BQE6 289 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 FRMD8P1Q9BZ68 369 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 CYLDQ9NQC7 956 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TLR8Q9NR97 1041 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 AAASQ9NRG9 546 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 SAGE1Q9NXZ1 904 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PCDHB12Q9Y5F1 795 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 A0A087WUV0 522 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 PARNO95453 639 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 CLTBP09497 229 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TNFRSF8P28908 595 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 LBX1P52954 281 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PITX1P78337 314 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 COG7P83436 770 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 CCSAPQ6IQ19 270 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 TFAP2DQ7Z6R9 452 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TMCO2Q7Z6W1 182 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 FAM126BQ8IXS8 530 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ATP11CQ8NB49 1132 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ARHGEF2Q92974 986 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 TTC25Q96NG3 672 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PEBP4Q96S96 227 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ZNF670Q9BS34 389 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 GPR62Q9BZJ7 368 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 MLXIPLQ9NP71 852 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 INTS9Q9NV88 658 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 DRG1Q9Y295 367 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ERCC2P18074 760 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 STX2P32856 288 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 NRLP54845 237 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 MORF4L2Q15014 288 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TERF2Q15554 542 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 XKR4Q5GH76 650 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 RTN4RL1Q86UN2 441 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ATPAF2Q8N5M1 289 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PLD5Q8N7P1 536 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PPP1R14CQ8TAE6 165 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 CSPG4P5Q96PW8 444 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 LGMNQ99538 433 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 CATSPERBQ9H7T0 1116 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 DONSONQ9NYP3 566 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 HCSTQ9UBK5 93 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 A0A1W2PQH9 124 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 CCDC78A2IDD5 438 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 OR6C75A6NL08 312 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 RASA4BC9J798 803 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SYN3O14994 580 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 MDM4O15151 490 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 RASA4O43374 803 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 ATP9BO43861 1147 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 FAM163BP0C2L3 166 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 CHKAP35790 457 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 TBX4P57082 545 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 TAF10Q12962 218 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 PPM1NQ8N819 430 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 PCDH19Q8TAB3 1148 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 EPS8L3Q8TE67 593 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 DIS3LQ8TF46 1054 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 DEPDC1BQ8WUY9 529 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 EXOC4Q96A65 974 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 C11orf49Q9H6J7 331 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 VANGL2Q9ULK5 521 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 ARID2Q68CP9 1835 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 GABRDO14764 452 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 ITGAVP06756 1048 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SLC2A3P11169 496 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 CSF2RAP15509 400 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 HOXC8P31273 242 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 DSC3Q14574 896 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 CYP1B1Q16678 543 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 RNF187Q5TA31 235 aaPredicted RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 GPRIN1Q7Z2K8 1008 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 LRRTM3Q86VH5 581 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 DQX1Q8TE96 717 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SERPINB11Q96P15 392 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SMC6Q96SB8 1091 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 SP110Q9HB58 689 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms