RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 PPM1LQ5SGD2 360 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 AAGABQ6PD74 315 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 TMC7Q7Z402 723 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 ZFP28Q8NHY6 868 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 CIB1Q99828 191 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 ARMC7Q9H6L4 198 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 CDY2AQ9Y6F7 541 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 CDY1Q9Y6F8 540 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 GLRA3O75311 464 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 CRCPO75575 148 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 TGDSO95455 350 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 THRAP10827 490 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 NR1H2P55055 460 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 LDLRAP1Q5SW96 308 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 APOBEC3HQ6NTF7 200 aaKnown RBP14.97□□□□□ -0.01
PRDM4-201ENST00000228437 FASTKD5Q7L8L6 764 aaKnown RBP14.97□□□□□ -0.01
PRDM4-201ENST00000228437 FBXW8Q8N3Y1 598 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 PIF1Q9H611 641 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 CYP4F12Q9HCS2 524 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 HESX1Q9UBX0 185 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 A0A0J9YVX5 310 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 NR4A1P22736 598 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 GRIA1P42261 906 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 TRAF2Q12933 501 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 DUOXA2Q1HG44 320 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 MYLK3Q32MK0 819 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 GPR107Q5VW38 600 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
PRDM4-201ENST00000228437 PLEKHG4BQ96PX9 1271 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 NPAS2Q99743 824 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 SLC38A10Q9HBR0 1119 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 GPAMQ9HCL2 828 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 PHF24Q9UPV7 400 aa14.97□□□□□ -0.01
PRDM4-201ENST00000228437 PSAPP07602 524 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 PABPC4LP0CB38 370 aaKnown RBP14.96□□□□□ -0.01
PRDM4-201ENST00000228437 JAK3P52333 1124 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 SLC5A3P53794 718 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.01
PRDM4-201ENST00000228437 BAATQ14032 418 aaPredicted RBP14.96□□□□□ -0.01
PRDM4-201ENST00000228437 TRIM16LQ309B1 348 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 PERM1Q5SV97 790 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 EXOC8Q8IYI6 725 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 RXFP2Q8WXD0 754 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 FIZ1Q96SL8 496 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 SLC4A5Q9BY07 1137 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 ZNRF3Q9ULT6 936 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 A0A088AWK7 358 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 GMNNO75496 209 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 MGAT1P26572 445 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 ARL4AP40617 200 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 ENTPD1P49961 510 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 SERPINB9P50453 376 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 C21orf59P57076 290 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 KRT76Q01546 638 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 APOBEC3GQ9HC16 384 aaKnown RBP14.96□□□□□ -0.01
PRDM4-201ENST00000228437 DMTF1Q9Y222 760 aa14.96□□□□□ -0.01
PRDM4-201ENST00000228437 CA8P35219 290 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 CARTPTQ16568 116 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 MTX3Q5HYI7 312 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 SPATA6LQ8N4H0 392 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 ILKAPQ9H0C8 392 aaPredicted RBP14.96□□□□□ -0.02
PRDM4-201ENST00000228437 CAB39LQ9H9S4 337 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 PSMD13Q9UNM6 376 aa14.96□□□□□ -0.02
PRDM4-201ENST00000228437 ME2P23368 584 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 FOXD4Q12950 439 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 MAPK11Q15759 364 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 SH3PXD2AQ5TCZ1 1133 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 SLFN12LQ6IEE8 588 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 UNC5AQ6ZN44 842 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 MAP4K3Q8IVH8 894 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 FAM47BQ8NA70 645 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 GABPB2Q8TAK5 448 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 PDCD6IPQ8WUM4 868 aaKnown RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 KLHL25Q9H0H3 589 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 TLE6Q9H808 572 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 PTPRHQ9HD43 1115 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 TRNAU1APQ9NX07 287 aaKnown RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 MYRFQ9Y2G1 1151 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 TTC36A6NLP5 189 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 H0YCG3 227 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 CST3P01034 146 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 ZFXP17010 805 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 XRCC1P18887 633 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 IL1R2P27930 398 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 NUMBP49757 651 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 RALGDSQ12967 914 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 KLF10Q13118 480 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 DGKZQ13574 1117 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 TMEM198Q66K66 360 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 RSBN1LQ6PCB5 846 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 ZNF516Q92618 1163 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 RNF34Q969K3 372 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
PRDM4-201ENST00000228437 NIF3L1Q9GZT8 377 aa14.95□□□□□ -0.02
PRDM4-201ENST00000228437 WDR41Q9HAD4 459 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms