RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 HADHQ16836 314 aaKnown RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 SMTNL2Q2TAL5 461 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 ATAT1Q5SQI0 421 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 ZFYVE27Q5T4F4 411 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 TXNRD3NBQ6F5E7 133 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 BNIPLQ7Z465 357 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 ACSF2Q96CM8 615 aaPredicted RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 SLC46A2Q9BY10 475 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 USP18Q9UMW8 372 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 TRAV19A0A0A6YYK7 116 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 H3BQ06 376 aaPredicted RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 ENDOD1O94919 500 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 FSHRP23945 695 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 IL1R2P27930 398 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 MARCKSL1P49006 195 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 TBX4P57082 545 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 SLC25A11Q02978 314 aaKnown RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 CBX2Q14781 532 aaPredicted RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 COL19A1Q14993 1142 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 RPS6KA1Q15418 735 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 ELF2Q15723 593 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 KLHDC10Q6PID8 442 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 RHOT1Q8IXI2 618 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 ZNF276Q8N554 614 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 CCDC185Q8N715 623 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 KRT35Q92764 455 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 PGAP3Q96FM1 320 aaPredicted RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 PEBP4Q96S96 227 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 PSMB7Q99436 277 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 NCAPGQ9BPX3 1015 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 SMG9Q9H0W8 520 aaKnown RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 S1PR5Q9H228 398 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 WDCPQ9H6R7 721 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 WDR6Q9NNW5 1121 aaKnown RBP11.56□□□□□ -0.56
CTSC-201ENST00000227266 GKN1Q9NS71 199 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 KLHL11Q9NVR0 708 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 TLR6Q9Y2C9 796 aa11.56□□□□□ -0.56
CTSC-201ENST00000227266 MOCS2O96007 188 aaPredicted RBP11.55□□□□□ -0.56
CTSC-201ENST00000227266 ATP1A1P05023 1023 aaKnown RBP11.55□□□□□ -0.56
CTSC-201ENST00000227266 IRF1P10914 325 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 CCR1P32246 355 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 AVPR1AP37288 418 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 CXCR3P49682 368 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 FAM193AP78312 1265 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
CTSC-201ENST00000227266 ATP13A4Q4VNC1 1196 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 GET4Q7L5D6 327 aaPredicted RBP11.55□□□□□ -0.56
CTSC-201ENST00000227266 KRT222Q8N1A0 295 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 HSPH1Q92598 858 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 CD101Q93033 1021 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 TLR10Q9BXR5 811 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 TASP1Q9H6P5 420 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 TMPRSS4Q9NRS4 437 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
CTSC-201ENST00000227266 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 MTMR10Q9NXD2 777 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTSC-201ENST00000227266 CPQQ9Y646 472 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 CLUHO75153 1309 aa11.55□□□□□ -0.56
CTSC-201ENST00000227266 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 PSTPIP1O43586 416 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 OLFM2O95897 454 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 KRT7P08729 469 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 KCNA5P22460 613 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 DDX6P26196 483 aaKnown RBP eCLIP11.54□□□□□ -0.56
CTSC-201ENST00000227266 CTNNA1P35221 906 aaKnown RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 KCNQ1P51787 676 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 COG7P83436 770 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 EIF4EBP2Q13542 120 aaPredicted RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 CYP4V2Q6ZWL3 525 aaPredicted RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 CMTM8Q8IZV2 173 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 UBL4BQ8N7F7 174 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 MNS1Q8NEH6 495 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 ALG3Q92685 438 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 HES6Q96HZ4 224 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 MSLNLQ96KJ4 702 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 RIPOR3Q96MK2 946 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 ZSWIM3Q96MP5 696 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 TKTL2Q9H0I9 626 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 HBS1LQ9Y450 684 aaKnown RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 MYO16Q9Y6X6 1858 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 SPTBN5Q9NRC6 3674 aaKnown RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 BRWD1Q9NSI6 2320 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 EFCAB8A8MWE9 144 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 APOEP02649 317 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 RARAP10276 462 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 SLC2A3P11169 496 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
CTSC-201ENST00000227266 CTNNA2P26232 953 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 ADRA1BP35368 520 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 NNTQ13423 1086 aa11.54□□□□□ -0.56
CTSC-201ENST00000227266 ARL13BQ3SXY8 428 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms