RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TYRP14679 529 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 DRD1P21728 446 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 HOXC13P31276 330 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 PBX1P40424 430 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 GABRB2P47870 512 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.29
LSM5-201ENST00000223084 SEC13P55735 322 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 SNX16P57768 344 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
LSM5-201ENST00000223084 SATB1Q01826 763 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
LSM5-201ENST00000223084 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 EFHC1Q5JVL4 640 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
LSM5-201ENST00000223084 TSSK4Q6SA08 328 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 MMS22LQ6ZRQ5 1243 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 BEND5Q7L4P6 421 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 XYLT1Q86Y38 959 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 PHTF2Q8N3S3 785 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 C18orf8Q96DM3 657 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 PNKPQ96T60 521 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 AGPAT1Q99943 283 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.29
LSM5-201ENST00000223084 ASNSD1Q9NWL6 643 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 GOLGA8SH3BPF8 625 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 K7EQS6 105 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 TSPAN3O60637 253 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 KAT7O95251 611 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 APODP05090 189 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 GLI1P08151 1106 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 FERP16591 822 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 CHKAP35790 457 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 MRE11P49959 708 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 NHLH1Q02575 133 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 TOGARAM2Q6ZUX3 1019 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 SLC26A9Q7LBE3 791 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 ATOH1Q92858 354 aaPredicted RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 SERPINB11Q96P15 392 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 PHOX2BQ99453 314 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 TRIM62Q9BVG3 475 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 XPO4Q9C0E2 1151 aaKnown RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
LSM5-201ENST00000223084 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
LSM5-201ENST00000223084 KIAA1549LQ6ZVL6 1849 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 IRAK2O43187 625 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CACNG3O60359 315 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 DAB1O75553 588 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 MOCS2O96007 188 aaPredicted RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 IGLV3-25P01717 112 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 SP9P0CG40 484 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 EIF2DP41214 584 aaKnown RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 SGSHP51688 502 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 ZNF445P59923 1031 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CDK17Q00537 523 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 RING1Q06587 406 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 ASIC2Q16515 512 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 FBXO43Q4G163 708 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 EMC10Q5UCC4 262 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 NUGGCQ68CJ6 796 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 NADSYN1Q6IA69 706 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 GRAMD4Q6IC98 578 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 RFWD3Q6PCD5 774 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 UNC45BQ8IWX7 931 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 FAM204AQ9H8W3 233 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 ZDHHC4Q9NPG8 344 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 PRMT8Q9NR22 394 aaPredicted RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
LSM5-201ENST00000223084 DEC1Q9P2X7 70 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
LSM5-201ENST00000223084 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms