RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CREB3O43889 395 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 B4GALT3O60512 393 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 NFE2Q16621 373 aaPredicted RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 ZSCAN26Q16670 478 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 BSPRYQ5W0U4 402 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 HEATR6Q6AI08 1181 aaKnown RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 KCNT2Q6UVM3 1135 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 LRRC31Q6UY01 552 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 B4GALNT4Q76KP1 1039 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 TAB3Q8N5C8 712 aaPredicted RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 PYROXD1Q8WU10 500 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 TFB1MQ8WVM0 346 aaKnown RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 QKIQ96PU8 341 aaKnown RBP eCLIP18.02■□□□□ 0.482e-6■■■■■ 33.8
VRK1-201ENST00000216639 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 ZCWPW1Q9H0M4 648 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 RAB6BQ9NRW1 208 aa18.02■□□□□ 0.48
VRK1-201ENST00000216639 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.02■□□□□ 0.48
VRK1-201ENST00000216639 EXOC1LA0A1B0GW35 172 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 E7ESA3 106 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 STK10O94804 968 aaKnown RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 TSHRP16473 764 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 ATP2A2P16615 1042 aaKnown RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 LSP1P33241 339 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 IFI35P80217 286 aaPredicted RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 KCNJ11Q14654 390 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 SLC39A12Q504Y0 691 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 RFX8Q6ZV50 586 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 BHLHA9Q7RTU4 235 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 ATP11CQ8NB49 1132 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 EDEM1Q92611 657 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 FUBP3Q96I24 572 aaKnown RBP eCLIP18.01■□□□□ 0.47
VRK1-201ENST00000216639 DEFB118Q96PH6 123 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 MAGEB5Q9BZ81 275 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 WDCPQ9H6R7 721 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 WDR6Q9NNW5 1121 aaKnown RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 DTLQ9NZJ0 730 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 DNAJB4Q9UDY4 337 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 GCATO75600 419 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 TMEM63AO94886 807 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 MAP3K6O95382 1288 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 PARNO95453 639 aaKnown RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 MMP13P45452 471 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 HCAR3P49019 387 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 SLC10A2Q12908 348 aaPredicted RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 SELENOSQ9BQE4 189 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 BEGAINQ9BUH8 593 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
VRK1-201ENST00000216639 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 LGALS13Q9UHV8 139 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 ADAM28Q9UKQ2 775 aa18.01■□□□□ 0.47
VRK1-201ENST00000216639 C5orf60A6NFR6 353 aa18■□□□□ 0.47
VRK1-201ENST00000216639 PPP1R12AO14974 1030 aaPredicted RBP18■□□□□ 0.47
VRK1-201ENST00000216639 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
VRK1-201ENST00000216639 DGKIO75912 1065 aa18■□□□□ 0.47
VRK1-201ENST00000216639 ALDH2P05091 517 aa18■□□□□ 0.47
VRK1-201ENST00000216639 CXCR3P49682 368 aa18■□□□□ 0.47
VRK1-201ENST00000216639 TPI1P60174 286 aa18■□□□□ 0.47
VRK1-201ENST00000216639 FASTKD3Q14CZ7 662 aaKnown RBP18■□□□□ 0.47
VRK1-201ENST00000216639 PDK1Q15118 436 aa18■□□□□ 0.47
VRK1-201ENST00000216639 HP1BP3Q5SSJ5 553 aaPredicted RBP18■□□□□ 0.47
VRK1-201ENST00000216639 FNBP1LQ5T0N5 605 aa18■□□□□ 0.47
VRK1-201ENST00000216639 PALM2Q8IXS6 379 aa18■□□□□ 0.47
VRK1-201ENST00000216639 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
VRK1-201ENST00000216639 VPS52Q8N1B4 723 aa18■□□□□ 0.47
VRK1-201ENST00000216639 ARHGEF2Q92974 986 aaKnown RBP18■□□□□ 0.47
VRK1-201ENST00000216639 OLFM3Q96PB7 478 aa18■□□□□ 0.47
VRK1-201ENST00000216639 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
VRK1-201ENST00000216639 TMEM51Q9NW97 253 aa18■□□□□ 0.47
VRK1-201ENST00000216639 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
VRK1-201ENST00000216639 RAD54BQ9Y620 910 aa18■□□□□ 0.47
VRK1-201ENST00000216639 TCRBV7S3A2A0A539 114 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 TRIM66O15016 1216 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 SLC5A3P53794 718 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 NRLP54845 237 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 YWHAGP61981 247 aaKnown RBP eCLIP17.99■□□□□ 0.47
VRK1-201ENST00000216639 HTRA3P83110 453 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 NR1H3Q13133 447 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 DPYSQ14117 519 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 GPNMBQ14956 572 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 PAFAH1B3Q15102 231 aaKnown RBP17.99■□□□□ 0.47
VRK1-201ENST00000216639 BBS9Q3SYG4 887 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 VARS2Q5ST30 1063 aaKnown RBP17.99■□□□□ 0.47
VRK1-201ENST00000216639 BTBD8Q5XKL5 378 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 VSTM1Q6UX27 236 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 ARHGEF18Q6ZSZ5 1173 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 CTU1Q7Z7A3 348 aaKnown RBP17.99■□□□□ 0.47
VRK1-201ENST00000216639 ANKMY2Q8IV38 441 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 HTR3CQ8WXA8 447 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 RNF34Q969K3 372 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 CENPTQ96BT3 561 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 CASD1Q96PB1 797 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 EPAS1Q99814 870 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 RNF208Q9H0X6 261 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 EPN3Q9H201 632 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 TMPRSS4Q9NRS4 437 aa17.99■□□□□ 0.47
VRK1-201ENST00000216639 ABI2Q9NYB9 513 aaPredicted RBP17.99■□□□□ 0.47
VRK1-201ENST00000216639 ZMYND8Q9ULU4 1186 aaPredicted RBP17.99■□□□□ 0.47
VRK1-201ENST00000216639 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms