RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SNNO75324 88 aaPredicted RBP20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 NPR1P16066 1061 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 ADARP55265 1226 aaKnown RBP20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 MYLK3Q32MK0 819 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 FAM91A1Q658Y4 838 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 FBXW8Q8N3Y1 598 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 C1orf21Q9H246 121 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 USP29Q9HBJ7 922 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 ANLNQ9NQW6 1124 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 HSFX1Q9UBD0 423 aa20.72■□□□□ 0.91
PPP1R3F-201ENST00000055335 SPDYE2BA6NHP3 402 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 LSM8O95777 96 aaKnown RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 TRUB2O95900 331 aaKnown RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 SPDYE6P0CI01 402 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 DESP17661 470 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 GTF2A2P52657 109 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 SPDYE2Q495Y8 402 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 PPM1LQ5SGD2 360 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 MIPOL1Q8TD10 442 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 CDRT15Q96T59 188 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 C17orf75Q9HAS0 396 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 JPH1Q9HDC5 661 aaPredicted RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ATP6V1G1O75348 118 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 TYK2P29597 1187 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 CRHR1P34998 444 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ACTR2P61160 394 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ACBD5Q5T8D3 534 aaPredicted RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ATG14Q6ZNE5 492 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 MAVSQ7Z434 540 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 PQLC1Q8N2U9 271 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 FAM156AQ8NDB6 213 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ZSCAN18Q8TBC5 510 aaPredicted RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 SLC7A3Q8WY07 619 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 MARK4Q96L34 752 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 ARHGAP26Q9UNA1 814 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 METTL18O95568 372 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 HSPA4LO95757 839 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 EIF4BP23588 611 aaKnown RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 PTPN7P35236 360 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 YWHAEP62258 255 aaKnown RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 FLOT2Q14254 428 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 NOMO1Q15155 1222 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 SLFN12LQ6IEE8 588 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 PPP1R2P3Q6NXS1 205 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 CMC1Q7Z7K0 106 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 GSDMBQ8TAX9 411 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 SEMA6AQ9H2E6 1030 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 Q9H521 79 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 WDR55Q9H6Y2 383 aaPredicted RBP20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 BTBD7Q9P203 1132 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 RIPK3Q9Y572 518 aa20.71■□□□□ 0.91
PPP1R3F-201ENST00000055335 CCNT2O60583 730 aaKnown RBP20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 CRTAMO95727 393 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 AMHP03971 560 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 COX4I1P13073 169 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 PIWIL1Q96J94 861 aaKnown RBP20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 LENG8Q96PV6 779 aaPredicted RBP20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 CCDC28BQ9BUN5 200 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 CHADO15335 359 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 SMIM18P0DKX4 95 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 HDAC4P56524 1084 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 PRICKLE1Q96MT3 831 aaPredicted RBP20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 MAGEB5Q9BZ81 275 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 PLAC1Q9HBJ0 212 aa20.7■□□□□ 0.9
PPP1R3F-201ENST00000055335 LDHAP00338 332 aaKnown RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 HPCAP84074 193 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 RARS2Q5T160 578 aaKnown RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 MBLAC2Q68D91 279 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 TRIM67Q6ZTA4 783 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 TRIML2Q8N7C3 387 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 RXFP2Q8WXD0 754 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 JADE3Q92613 823 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 HSPBAP1Q96EW2 488 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 HMGXB4Q9UGU5 601 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 STX16-NPEPL1H3BU86 382 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 DNAJA2O60884 412 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 RALBP11234 206 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 FGF3P11487 239 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 TFDP2Q14188 446 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 DUOXA2Q1HG44 320 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 ACTRT2Q8TDY3 377 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 WNK4Q96J92 1243 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 HEXIM2Q96MH2 286 aaKnown RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 ASNSD1Q9NWL6 643 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMEM216Q9P0N5 145 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 SEPT10Q9P0V9 454 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 FAF1Q9UNN5 650 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 GNEQ9Y223 722 aaKnown RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 PSAT1Q9Y617 370 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZBTB14O43829 449 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 FGFR3P22607 806 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 PTGER2P43116 358 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 CYLC2Q14093 348 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 PDE1CQ14123 709 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 TSHZ1Q6ZSZ6 1077 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 NIPA1Q7RTP0 329 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZDHHC7Q9NXF8 308 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 PTTG2Q9NZH5 202 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms