RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SMOC2Q9H3U7 446 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 FAM204AQ9H8W3 233 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 CLIC5Q9NZA1 410 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 GRHL1Q9NZI5 618 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 FNIP2Q9P278 1114 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PAK5Q9P286 719 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 MTRRQ9UBK8 725 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 PRKAG2Q9UGJ0 569 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 ANAPC5Q9UJX4 755 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 FBXW11Q9UKB1 542 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 DNPEPQ9ULA0 475 aa10.1□□□□□ -0.79
PHGDH-215ENST00000641371 R3HDM2Q9Y2K5 976 aaKnown RBP10.1□□□□□ -0.79
PHGDH-215ENST00000641371 MYO16Q9Y6X6 1858 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 YJEFN3A6XGL0 299 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 E7ENQ6 273 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 DNALI1O14645 258 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 TNFRSF10BO14763 440 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PPP1R12AO14974 1030 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 MTSS1O43312 755 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 B4GALT3O60512 393 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 STK10O94804 968 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 IGLV3-25P01717 112 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 SOD2P04179 222 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 NUDT17P0C025 328 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 MX2P20592 715 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 CYP2F1P24903 491 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 ADRA1BP35368 520 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 CXCR3P49682 368 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 MRPS25P82663 173 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF33AQ06730 810 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 DHX9Q08211 1270 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PDK1Q15118 436 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 P3H1Q32P28 736 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 DENND2CQ68D51 928 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 KIAA1841Q6NSI8 718 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 DARS2Q6PI48 645 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 CEP57Q86XR8 500 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 GSPT2Q8IYD1 628 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 IQCKQ8N0W5 287 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PLD5Q8N7P1 536 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 FBXO25Q8TCJ0 367 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 IGSF21Q96ID5 467 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 CSPG4P5Q96PW8 444 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 HERPUD2Q9BSE4 406 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 HERC2P3Q9BVR0 1158 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 TXLNGYQ9BZA5 131 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 GPR62Q9BZJ7 368 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 STMN4Q9H169 189 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PABPC3Q9H361 631 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 RETREG1Q9H6L5 497 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 PPCSQ9HAB8 311 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 TLR8Q9NR97 1041 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 TMLHEQ9NVH6 421 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 DDIT4Q9NX09 232 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 SLC12A6Q9UHW9 1150 aa10.09□□□□□ -0.79
PHGDH-215ENST00000641371 TPX2Q9ULW0 747 aaKnown RBP10.09□□□□□ -0.79
PHGDH-215ENST00000641371 CLUHO75153 1309 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 MTMR11A4FU01 709 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 H7C0C1 242 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 IRAK2O43187 625 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 EFEMP2O95967 443 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 CD48P09326 243 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 HAPLN1P10915 354 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 TSHRP16473 764 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 IGFBP6P24592 240 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 IVDP26440 423 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 YWHAQP27348 245 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 CCR1P32246 355 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 ATP5OP48047 213 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PPP3CCP48454 512 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 NDUFV1P49821 464 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PMS2P54278 862 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 DYNLT1P63172 113 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 CBLBQ13191 982 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PAFAH1B3Q15102 231 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 LRRC26Q2I0M4 334 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 SLC45A4Q5BKX6 768 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PPP6R3Q5H9R7 873 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 SPOUT1Q5T280 376 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 IZUMO3Q5VZ72 239 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 HIBCHQ6NVY1 386 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 RHBDF2Q6PJF5 856 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 KCNT2Q6UVM3 1135 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 ZDHHC24Q6UX98 284 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 DENND5BQ6ZUT9 1274 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 FAM131BQ86XD5 332 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms