RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PHTF1Q9UMS5 762 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 STARD13Q9Y3M8 1113 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 MFHAS1Q9Y4C4 1052 aa17.69■□□□□ 0.42
PHGDH-211ENST00000641213 MANSC4A6NHS7 340 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 GABRDO14764 452 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 DAB1O75553 588 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 TOMM70O94826 608 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 METTL18O95568 372 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 SLC8A3P57103 927 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 MRPS5P82675 430 aaKnown RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 MRPS6P82932 125 aaKnown RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 MGAT5Q09328 741 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 PTK7Q13308 1070 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 OTUD1Q5VV17 481 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 TAF2Q6P1X5 1199 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 PRPF39Q86UA1 669 aaKnown RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 MCUQ8NE86 351 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 RMDN2Q96LZ7 410 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 KLF6Q99612 283 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 POPDC2Q9HBU9 364 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 DTLQ9NZJ0 730 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 KLHL14Q9P2G3 628 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 TTLL3Q9Y4R7 772 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 IQANK1A0A1B0GTG1 560 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 GOLGA8RI6L899 631 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 C1QAP02745 245 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 NDUFV1P49821 464 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 DCAF6Q58WW2 860 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 KIAA0319Q5VV43 1072 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 RNF43Q68DV7 783 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 CLEC20AQ6ZU45 233 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 GSTCDQ8NEC7 633 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 LRRC8CQ8TDW0 803 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 KCTD13Q8WZ19 329 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 NT5C3BQ969T7 300 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 ALKBH8Q96BT7 664 aaKnown RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 TSPYL2Q9H2G4 693 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-211ENST00000641213 SLCO1B3Q9NPD5 702 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 KLC4Q9NSK0 619 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 TMEM51Q9NW97 253 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 IKBKGQ9Y6K9 419 aa17.68■□□□□ 0.42
PHGDH-211ENST00000641213 FAM163BP0C2L3 166 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 C6orf222P0C671 652 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 RARBP10826 455 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 AKR1A1P14550 325 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ADRA1DP25100 572 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ARL4AP40617 200 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 MDH1BQ5I0G3 518 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 BNIPLQ7Z465 357 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 FITM2Q8N6M3 262 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 GBP7Q8N8V2 638 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 CCDC63Q8NA47 563 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 TCP10LQ8TDR4 215 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 PLAC1Q9HBJ0 212 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 RXFP1Q9HBX9 757 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ZC3H7BQ9UGR2 993 aaKnown RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 TDRD15B5MCY1 1934 aaKnown RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 TM9SF1O15321 606 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 EDF1O60869 148 aaKnown RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 DGKIO75912 1065 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 MT-ND3P03897 115 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 INHBAP08476 426 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 NOS2P35228 1153 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 MAGEA3P43357 314 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 FAAP100Q0VG06 881 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 HEATR6Q6AI08 1181 aaKnown RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ZNF534Q76KX8 674 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ECHDC2Q86YB7 292 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 PSTKQ8IV42 348 aaKnown RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 TRPV1Q8NER1 839 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ZNF75CPQ92670 426 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 SERAC1Q96JX3 654 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 OLFM3Q96PB7 478 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 NPY6RQ99463 290 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 MED10Q9BTT4 135 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 TMPRSS4Q9NRS4 437 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-211ENST00000641213 ST3GAL5Q9UNP4 418 aa17.67■□□□□ 0.42
PHGDH-211ENST00000641213 M0QZ92 97 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 TNPO2O14787 897 aaKnown RBP17.66■□□□□ 0.42
PHGDH-211ENST00000641213 DUSP11O75319 330 aaKnown RBP17.66■□□□□ 0.42
PHGDH-211ENST00000641213 TPSB2P20231 275 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 MLH1P40692 756 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 BNIP1Q12981 228 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 TPSAB1Q15661 275 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 LRRC39Q96DD0 335 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 SENP8Q96LD8 212 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 C12orf65Q9H3J6 166 aaKnown RBP17.66■□□□□ 0.42
PHGDH-211ENST00000641213 LRRC4Q9HBW1 653 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 CRTAC1Q9NQ79 661 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 ARHGEF4Q9NR80 690 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 FAM105AQ9NUU6 356 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 SLC38A7Q9NVC3 462 aa17.66■□□□□ 0.42
PHGDH-211ENST00000641213 DDX43Q9NXZ2 648 aaKnown RBP17.66■□□□□ 0.42
PHGDH-211ENST00000641213 SLC17A7Q9P2U7 560 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms