RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 NLRC5Q86WI3 1866 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 KCNK3O14649 394 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 MDM4O15151 490 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 RFPL2O75678 378 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 URI1O94763 535 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 IL1R2P27930 398 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CCR1P32246 355 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 ADRA1BP35368 520 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 COPS2P61201 443 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PITX1P78337 314 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 RING1Q06587 406 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 HYAL1Q12794 435 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 ADAM15Q13444 863 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PPP2R5DQ14738 602 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PDK2Q15119 407 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 TRIP4Q15650 581 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CDO1Q16878 200 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 TCEAL5Q5H9L2 206 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 GAREM2Q75VX8 874 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 VSIG1Q86XK7 387 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 HS6ST3Q8IZP7 471 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 ALG3Q92685 438 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF707Q96C28 371 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CORO1BQ9BR76 489 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 TTYH1Q9H313 450 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PRDM12Q9H4Q4 367 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 WDR6Q9NNW5 1121 aaKnown RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 RRAGDQ9NQL2 400 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PIGVQ9NUD9 493 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 MARCH2Q9P0N8 246 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CALCOCO1Q9P1Z2 691 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 DNMT3BQ9UBC3 853 aaKnown RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 SLC12A6Q9UHW9 1150 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CDC23Q9UJX2 597 aa13.93□□□□□ -0.18
LINC00643-207ENST00000637212 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
LINC00643-207ENST00000637212 CLUHO75153 1309 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 IRAK2O43187 625 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 TBX18O95935 607 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 RHOP08100 348 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 RARAP10276 462 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 GABRR2P28476 465 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF135P52742 658 aaPredicted RBP13.92□□□□□ -0.18
LINC00643-207ENST00000637212 COG7P83436 770 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 SCAPQ12770 1279 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 EFEMP1Q12805 493 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ODF2Q5BJF6 829 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 PDZD4Q76G19 769 aaPredicted RBP13.92□□□□□ -0.18
LINC00643-207ENST00000637212 RASGEF1CQ8N431 466 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 KCTD6Q8NC69 237 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 VN1R2Q8NFZ6 395 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 FAM71BQ8TC56 605 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 RNF34Q969K3 372 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 RBM41Q96IZ5 413 aaKnown RBP13.92□□□□□ -0.18
LINC00643-207ENST00000637212 HAPLN3Q96S86 360 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 OSBPL2Q9H1P3 480 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 CCSER2Q9H7U1 834 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ZWILCHQ9H900 591 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ARHGEF38Q9NXL2 777 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 SFMBT1Q9UHJ3 866 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 FZD10Q9ULW2 581 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 EFR3BQ9Y2G0 817 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 PLXNA4Q9HCM2 1894 aa13.92□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF487B1APH4 448 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 SOX1O00570 391 aaPredicted RBP13.91□□□□□ -0.18
LINC00643-207ENST00000637212 COCHO43405 550 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 TADA3O75528 432 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 OLFM2O95897 454 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 PYGMP11217 842 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 MYL4P12829 197 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 TCF4P15884 667 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 HDCP19113 662 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 KDELR1P24390 212 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 PTPN7P35236 360 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ARSEP51690 589 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 TBX4P57082 545 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 WHAMMP3Q1A5X7 153 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ATP13A4Q4VNC1 1196 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ZNF697Q5TEC3 545 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ANKRD54Q6NXT1 300 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 CYP4V2Q6ZWL3 525 aaPredicted RBP13.91□□□□□ -0.18
LINC00643-207ENST00000637212 UNC45BQ8IWX7 931 aa13.91□□□□□ -0.18
LINC00643-207ENST00000637212 ADAM32Q8TC27 787 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms