RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 ROPN1Q9HAT0 212 aaPredicted RBP14.79□□□□□ -0.04
LIMS4-204ENST00000632897 TMEM30AQ9NV96 361 aa14.79□□□□□ -0.04
LIMS4-204ENST00000632897 TMLHEQ9NVH6 421 aa14.79□□□□□ -0.04
LIMS4-204ENST00000632897 MTMR10Q9NXD2 777 aa14.79□□□□□ -0.04
LIMS4-204ENST00000632897 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.79□□□□□ -0.04
LIMS4-204ENST00000632897 PATJQ8NI35 1801 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 BCLAF3A2AJT9 711 aaKnown RBP14.78□□□□□ -0.04
LIMS4-204ENST00000632897 H3BRJ5 948 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 H7C0C1 242 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 TTC4O95801 387 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 F9P00740 461 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 FYNP06241 537 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 ATP5OP48047 213 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 SCAPQ12770 1279 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 LRRC26Q2I0M4 334 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 LRIT3Q3SXY7 679 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 EFHC2Q5JST6 749 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 C4orf22Q6V702 233 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 KDM7AQ6ZMT4 941 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 BHLHA9Q7RTU4 235 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 ANKRD33Q7Z3H0 272 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 PRUNE1Q86TP1 453 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 LRRTM3Q86VH5 581 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 FAM131BQ86XD5 332 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-204ENST00000632897 UNC45BQ8IWX7 931 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 PPIL6Q8IXY8 311 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 ARFGAP2Q8N6H7 521 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 PGM2Q96G03 612 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 CSPG4P5Q96PW8 444 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 MRPL9Q9BYD2 267 aaKnown RBP14.78□□□□□ -0.04
LIMS4-204ENST00000632897 ZCWPW1Q9H0M4 648 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 CALCOCO1Q9P1Z2 691 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 LRFN2Q9ULH4 789 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-204ENST00000632897 USP3Q9Y6I4 520 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 TANC1Q9C0D5 1861 aa14.78□□□□□ -0.04
LIMS4-204ENST00000632897 YJEFN3A6XGL0 299 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 E7ENQ6 273 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 ZNF189O75820 626 aaPredicted RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 SHBGP04278 402 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 ABHD2P08910 425 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 USP17L7P0C7H9 530 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NR1D1P20393 614 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 RPL22P35268 128 aaKnown RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 ZNF135P52742 658 aaPredicted RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 GDF10P55107 478 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NFE2Q16621 373 aaPredicted RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 KCTD16Q68DU8 428 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NPNTQ6UXI9 565 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 BZW1Q7L1Q6 419 aaKnown RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 FAM71DQ8N9W8 422 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 FUBP3Q96I24 572 aaKnown RBP eCLIP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 TTC25Q96NG3 672 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 CASD1Q96PB1 797 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 TMEM209Q96SK2 561 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 STMN4Q9H169 189 aaPredicted RBP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 TMEM51Q9NW97 253 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NINJ2Q9NZG7 142 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 PAK5Q9P286 719 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NAALADL1Q9UQQ1 740 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 SF3B1O75533 1304 aaKnown RBP eCLIP14.77□□□□□ -0.04
LIMS4-204ENST00000632897 NLRC5Q86WI3 1866 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 PTPRDP23468 1912 aa14.77□□□□□ -0.04
LIMS4-204ENST00000632897 F8W810 466 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 PQBP1O60828 265 aaKnown RBP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 SHOX2O60902 331 aaPredicted RBP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 TADA2AO75478 443 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 CXCL10P02778 98 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 ACTN2P35609 894 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 MAGEA4P43358 317 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 LMAN1P49257 510 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 CENPUQ71F23 418 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 ZC3H18Q86VM9 953 aaKnown RBP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 NPAS4Q8IUM7 802 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 SH2D3CQ8N5H7 860 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 NAT8LQ8N9F0 302 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 TOX2Q96NM4 488 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 RBM15Q96T37 977 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 TMEM175Q9BSA9 504 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 RHOBTB2Q9BYZ6 727 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 CENPHQ9H3R5 247 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 PIGVQ9NUD9 493 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 CWC15Q9P013 229 aaKnown RBP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 PRG3Q9Y2Y8 225 aaPredicted RBP14.76□□□□□ -0.05
LIMS4-204ENST00000632897 HEY1Q9Y5J3 304 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 OR6C75A6NL08 312 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 HACD1B0YJ81 288 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 TCEA3O75764 348 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 NCAM1P13591 858 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 RABGGTBP53611 331 aa14.76□□□□□ -0.05
LIMS4-204ENST00000632897 PITX1P78337 314 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms