RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 ANKRD20A8PQ5CZ79 823 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 LDLRAD1Q5T700 205 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 TRMT10BQ6PF06 316 aaKnown RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 SPATA31D4Q6ZUB0 917 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 MPP5Q8N3R9 675 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 ALLCQ8N6M5 410 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 COLGALT1Q8NBJ5 622 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 PCDH19Q8TAB3 1148 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 CPT1BQ92523 772 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 AZIN2Q96A70 460 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 TKTL2Q9H0I9 626 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 RPS6KL1Q9Y6S9 549 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 RANBP2P49792 3224 aaKnown RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 DOCK3Q8IZD9 2030 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 H0YGN5 161 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 LGR5O75473 907 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 RPL17P18621 184 aaKnown RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 PSMB4P28070 264 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 TYK2P29597 1187 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 GATMP50440 423 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 ZNF268Q14587 947 aaPredicted RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 DCAF4L1Q3SXM0 396 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 BOLA3Q53S33 107 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 POLNQ7Z5Q5 900 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 PACS2Q86VP3 889 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 IGDCC3Q8IVU1 814 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 OR6P1Q8NGX9 317 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 PRCCQ92733 491 aaPredicted RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 PCED1BQ96HM7 432 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 RNF157Q96PX1 679 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 SUDS3Q9H7L9 328 aaPredicted RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 ZFATQ9P243 1243 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 PPARGC1AQ9UBK2 798 aaKnown RBP7.78□□□□□ -1.16
PKP4-217ENST00000628904 HAO1Q9UJM8 370 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 NFS1Q9Y697 457 aa7.78□□□□□ -1.16
PKP4-217ENST00000628904 CES2O00748 559 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 NRP1O14786 923 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 TRAPPC3O43617 180 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CBX6O95503 412 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ITGB1P05556 798 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 TSPY1Q01534 308 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 STAT4Q14765 748 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 SPATA21Q7Z572 469 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 PRPF39Q86UA1 669 aaKnown RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 FAM228AQ86W67 206 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 OSTM1Q86WC4 334 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 PLD5Q8N7P1 536 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 WNT8BQ93098 351 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CCDC124Q96CT7 223 aaKnown RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 VCPIP1Q96JH7 1222 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CYP4F11Q9HBI6 524 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 PCDH18Q9HCL0 1135 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 PACSIN3Q9UKS6 424 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 STYXL1Q9Y6J8 313 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ARHGAP42A6NI28 874 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 METTL18O95568 372 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 GRM5P41594 1212 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ALDH18A1P54886 795 aaKnown RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 TAP1Q03518 808 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 SLC1A5Q15758 541 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 AGBL2Q5U5Z8 902 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 OVOS1Q6IE37 1185 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 TRNP1Q6NT89 227 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ARID3BQ8IVW6 561 aaPredicted RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 CCNYL1Q8N7R7 359 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 OR52K1Q8NGK4 314 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CD99L2Q8TCZ2 262 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 NAT14Q8WUY8 206 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 MCUR1Q96AQ8 359 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 EXOC2Q96KP1 924 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CYTH2Q99418 400 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ECT2Q9H8V3 914 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 VANGL2Q9ULK5 521 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 A8MX80 341 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 APOC4-APOC2K7ER74 178 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 RNF103O00237 685 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 APOC2P02655 101 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 PAEPP09466 180 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 MAGEA9P43362 315 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 GPR15P49685 360 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 GTF2A1P52655 376 aaPredicted RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 FCGRTP55899 365 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 HDAC4P56524 1084 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 GEMIN4P57678 1058 aaKnown RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 PTP4A2Q12974 167 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 HSP90AA5PQ58FG0 334 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 FAM171A1Q5VUB5 890 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CDCA2Q69YH5 1023 aaPredicted RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 GLB1LQ6UWU2 654 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 CIR1Q86X95 450 aaPredicted RBP7.77□□□□□ -1.17
PKP4-217ENST00000628904 DTX3LQ8TDB6 740 aa7.77□□□□□ -1.17
PKP4-217ENST00000628904 TFB1MQ8WVM0 346 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms