RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 TAF5Q15542 800 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 CTC1Q2NKJ3 1217 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 CCDC14Q49A88 953 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 DNTTIP2Q5QJE6 756 aaKnown RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 GPR158Q5T848 1215 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 SCYL2Q6P3W7 929 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 BHLHA9Q7RTU4 235 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 GRASPQ7Z6J2 395 aaPredicted RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 SLFN11Q7Z7L1 901 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 SCD5Q86SK9 330 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 DEFB123Q8N688 67 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 DQX1Q8TE96 717 aaKnown RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TEKT4Q8WW24 435 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 CENPIQ92674 756 aaPredicted RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 E2F7Q96AV8 911 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 PIWIL1Q96J94 861 aaKnown RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 FAM161BQ96MY7 647 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 KIF9Q9HAQ2 790 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TRPC7Q9HCX4 862 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 DONSONQ9NYP3 566 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 DNMT3BQ9UBC3 853 aaKnown RBP11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TRIM10Q9UDY6 481 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
SNORD3D-201ENST00000619178 NUP205Q92621 2012 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 GRID2IPA4D2P6 1211 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 IRAK2O43187 625 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 LATS1O95835 1130 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 GLP2RO95838 553 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 OAS1P00973 400 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 COMTP21964 271 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 HTR7P34969 479 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 SLC11A2P49281 568 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 SKIV2LQ15477 1246 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 ERMARDQ5T6L9 678 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 LRRC57Q8N9N7 239 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 KIF18AQ8NI77 898 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 NTAN1Q96AB6 310 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 ZNF707Q96C28 371 aaPredicted RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 RBM41Q96IZ5 413 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 NAPGQ99747 312 aaPredicted RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 LRRC3Q9BY71 257 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 PRDM16Q9HAZ2 1276 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 GDE1Q9NZC3 331 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 USP18Q9UMW8 372 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 CAPN6Q9Y6Q1 641 aa11.48□□□□□ -0.57
SNORD3D-201ENST00000619178 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 TYW5A2RUC4 315 aaKnown RBP11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 MDM4O15151 490 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 COCHO43405 550 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 LRCH4O75427 683 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 GJB6O95452 261 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 IGLV3-25P01717 112 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 FYNP06241 537 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 CTNNA2P26232 953 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 WEE1P30291 646 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 MIPP30301 263 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 ARL4AP40617 200 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 CXCR3P49682 368 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 RWDD2BP57060 319 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 COPS2P61201 443 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 SLC7A9P82251 487 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 PDK2Q15119 407 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 PUS10Q3MIT2 529 aaKnown RBP11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 SEL1L2Q5TEA6 688 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 NYAP1Q6ZVC0 841 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 TAC4Q86UU9 113 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 NT5DC3Q86UY8 548 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 VSIG1Q86XK7 387 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 MIB1Q86YT6 1006 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 HS6ST3Q8IZP7 471 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 CMTM8Q8IZV2 173 aa11.47□□□□□ -0.57
SNORD3D-201ENST00000619178 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms