RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LINC01565O15544 149 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 MBTPS2O43462 519 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 B4GALT3O60512 393 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 TBX10O75333 385 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 BEST1O76090 585 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 URODP06132 367 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 USP17L7P0C7H9 530 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 NCAM1P13591 858 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 ALADP13716 330 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 CDKN2BP42772 138 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 CLCN6P51797 869 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 VSNL1P62760 191 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 ADCY1Q08828 1119 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 ADAM15Q13444 863 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 HLTFQ14527 1009 aaKnown RBP eCLIP17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 PSMD5Q16401 504 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 EFHC2Q5JST6 749 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 EMBQ6PCB8 327 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 MFSD7Q6UXD7 560 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 CCNI2Q6ZMN8 369 aaPredicted RBP17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 GSTA5Q7RTV2 222 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 HDXQ7Z353 690 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 CPNE8Q86YQ8 564 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 ADHFE1Q8IWW8 467 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 GPR65Q8IYL9 337 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 PRELID2Q8N945 189 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 KLHL23Q8NBE8 558 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 PIK3R5Q8WYR1 880 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 HAUS1Q96CS2 278 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 HEMGNQ9BXL5 484 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 IGFLR1Q9H665 355 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 FAM204AQ9H8W3 233 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.46■□□□□ 0.383e-6■■□□□ 13.8
TRAPPC3-210ENST00000617904 RCOR3Q9P2K3 495 aaPredicted RBP17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 HSFX1Q9UBD0 423 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 MAFFQ9ULX9 164 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 NT5C1B-RDH14C9J2C7 533 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 F8W810 466 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 ENDOD1O94919 500 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 SOD2P04179 222 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 IRS1P35568 1242 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 GLUD2P49448 558 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC7A5Q01650 507 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 MTA1Q13330 715 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 TAF5Q15542 800 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 SMTNL2Q2TAL5 461 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 DAB2IPQ5VWQ8 1189 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 AADACL2Q6P093 401 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 DRICH1Q6PGQ1 229 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 BBS12Q6ZW61 710 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 PDZD4Q76G19 769 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 LRRTM3Q86VH5 581 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 CLEC4CQ8WTT0 213 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 IFT81Q8WYA0 676 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 RIN2Q8WYP3 895 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLCO2A1Q92959 643 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 RNF34Q969K3 372 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 PNKPQ96T60 521 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 NPY6RQ99463 290 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 ERP44Q9BS26 406 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 ZNF670Q9BS34 389 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 HERC2P3Q9BVR0 1158 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 DCLK3Q9C098 648 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 TSPYL1Q9H0U9 437 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 CWH43Q9H720 699 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 GDF3Q9NR23 364 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 USP3Q9Y6I4 520 aa17.45■□□□□ 0.38
TRAPPC3-210ENST00000617904 HHLA1C9JL84 531 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 H3BRJ5 948 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 MCF2LO15068 1137 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 DCXO43602 365 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 CYP2F1P24903 491 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC5A3P53794 718 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 DRG2P55039 364 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 YWHAGP61981 247 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 KLF1Q13351 362 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 NNTQ13423 1086 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 MGAT5BQ3V5L5 792 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 KCNT1Q5JUK3 1230 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 ADGRD2Q7Z7M1 963 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 TADA2BQ86TJ2 420 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 MON1AQ86VX9 555 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 JAMLQ86YT9 394 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC7A14Q8TBB6 771 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 RAPGEF5Q92565 580 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 PGAP3Q96FM1 320 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 PIWIL1Q96J94 861 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 SPATA17Q96L03 361 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms