RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 STC2O76061 302 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 NFATC1O95644 943 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 TRUB2O95900 331 aaKnown RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 FYNP06241 537 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 PLEKP08567 350 aaPredicted RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 MYBL1P10243 752 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 KRT3P12035 628 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 DESP17661 470 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 EIF4A3P38919 411 aaKnown RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 GSCP56915 257 aaPredicted RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 TBX4P57082 545 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 ZXDBP98169 803 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 AMPD2Q01433 879 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 RING1Q06587 406 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 NNTQ13423 1086 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 ITPRIPL2Q3MIP1 535 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 NUGGCQ68CJ6 796 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 WDR59Q6PJI9 974 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 UNC45BQ8IWX7 931 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 SHDQ96IW2 340 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.2
MDC1-209ENST00000613547 SFMBT1Q9UHJ3 866 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 TLR6Q9Y2C9 796 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 CUL9Q8IWT3 2517 aa13.83□□□□□ -0.2
MDC1-209ENST00000613547 MYO16Q9Y6X6 1858 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 MSI1O43347 362 aaKnown RBP13.82□□□□□ -0.2
MDC1-209ENST00000613547 AKR1B10O60218 316 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 ADH1CP00326 375 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 APOEP02649 317 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 SLC2A3P11169 496 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 GLULP15104 373 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 CORO1AP31146 461 aaKnown RBP13.82□□□□□ -0.2
MDC1-209ENST00000613547 SULT1E1P49888 294 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 MTA1Q13330 715 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 RUNX3Q13761 415 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 ALKBH5Q6P6C2 394 aaKnown RBP13.82□□□□□ -0.2
MDC1-209ENST00000613547 DCUN1D2Q6PH85 259 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 C1orf228Q6PIY5 440 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 SND1Q7KZF4 910 aaKnown RBP eCLIP13.82□□□□□ -0.2
MDC1-209ENST00000613547 TAC4Q86UU9 113 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 TC2NQ8N9U0 490 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 RIN3Q8TB24 985 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 RNF34Q969K3 372 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 EXOC4Q96A65 974 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 MSANTD3Q96H12 275 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 EBF3Q9H4W6 596 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 C8orf33Q9H7E9 229 aaPredicted RBP13.82□□□□□ -0.2
MDC1-209ENST00000613547 GRPEL1Q9HAV7 217 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 ARHGEF3Q9NR81 526 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 SLC12A6Q9UHW9 1150 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
MDC1-209ENST00000613547 OBSL1O75147 1896 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 C5orf42Q9H799 3197 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 A0A087X0T9 212 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SIGLEC16A6NMB1 481 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 M0QYT0 321 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 ARNTLO00327 626 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 IRAK2O43187 625 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 LATS1O95835 1130 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 F9P00740 461 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 FAM228BP0C875 321 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 RRM1P23921 792 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SDC4P31431 198 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 CHKAP35790 457 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 FLT3P36888 993 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SLC11A2P49281 568 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 PRKCQQ04759 706 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 NME3Q13232 169 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SLC18A3Q16572 532 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 EML3Q32P44 896 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SLC44A4Q53GD3 710 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 CCDC122Q5T0U0 273 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 PHLDB2Q86SQ0 1253 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 DENND1CQ8IV53 801 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 BBS7Q8IWZ6 715 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SIX5Q8N196 739 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 ADAM32Q8TC27 787 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
MDC1-209ENST00000613547 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms