RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GOLGA8TH3BQL2 631 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 NFKBIEO00221 500 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 TXNP10599 105 aaKnown RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 RARBP10826 455 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 MSX2P35548 267 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 SLC10A2Q12908 348 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 TNS4Q8IZW8 715 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 NLRP7Q8WX94 980 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 MTBPQ96DY7 904 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 UNKQ9C0B0 810 aaKnown RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 PLAC1Q9HBJ0 212 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 LNPEPQ9UIQ6 1025 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 TXNDC9O14530 226 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 STK10O94804 968 aaKnown RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 APOEP02649 317 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SKIP12755 728 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CYP2F1P24903 491 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CDH5P33151 784 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CYP4V2Q6ZWL3 525 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SPNS2Q8IVW8 549 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SCUBE1Q8IWY4 988 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 TP53INP2Q8IXH6 220 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 NME8Q8N427 588 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SLC26A7Q8TE54 656 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 PPM1HQ9ULR3 514 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 PSAT1Q9Y617 370 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ZBTB42B2RXF5 422 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 TRAFD1O14545 582 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CIB2O75838 187 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 KRT38O76015 456 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ZNF286BP0CG31 522 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ABCD1P33897 745 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 MLH1P40692 756 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 FASTKD1Q53R41 847 aaKnown RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CFAP157Q5JU67 520 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 LGSNQ5TDP6 509 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ENDOVQ8N8Q3 282 aaKnown RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 STKLD1Q8NE28 680 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 AZIN2Q96A70 460 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 GPR20Q99678 358 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 APOL2Q9BQE5 337 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 MRPL45Q9BRJ2 306 aaKnown RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ARHGEF4Q9NR80 690 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 PNPOQ9NVS9 261 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SLC7A8Q9UHI5 535 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CREB3O43889 395 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 DHRS4L1P0CG22 281 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SP100P23497 879 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 PTPN7P35236 360 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SLC18A2Q05940 514 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 AP1B1Q10567 949 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 TCHHL1Q5QJ38 904 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 N4BP2L1Q5TBK1 243 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 CMC1Q7Z7K0 106 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 SH3TC2Q8TF17 1288 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 ZNF483Q8TF39 744 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-207ENST00000612273 MCRS1Q96EZ8 462 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 LHX5Q9H2C1 402 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 DPEP3Q9H4B8 488 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 WDR35Q9P2L0 1181 aa14.54□□□□□ -0.08
COL6A1-207ENST00000612273 HMX2A2RU54 273 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 A6NJR5 290 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 INSRRP14616 1297 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ULK2Q8IYT8 1036 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 PANX3Q96QZ0 392 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 SPATC1LQ9H0A9 340 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 FAM49AQ9H0Q0 323 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 KRT82Q9NSB4 513 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 SCOCQ9UIL1 159 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 C2CD2Q9Y426 696 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 A6NHS1 94 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 KCNK1O00180 336 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 B4GALT4O60513 344 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ERVK-10P10266 1014 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 CCDC130P13994 396 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 CACNA2D1P54289 1103 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 VGLL4Q14135 290 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 TTLL12Q14166 644 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 SH2D5Q6ZV89 423 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 TTC30AQ86WT1 665 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 XAB2Q9HCS7 855 aaKnown RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 CPSF2Q9P2I0 782 aaKnown RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 GOT1P17174 413 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ARF4P18085 180 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 C6orf163Q5TEZ5 329 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 CDCA2Q69YH5 1023 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ADGRF2Q8IZF7 708 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 FNIP1Q8TF40 1166 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 NT5C1AQ9BXI3 368 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 OXCT2Q9BYC2 517 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-207ENST00000612273 WWP1Q9H0M0 922 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms