RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MDGA1Q8NFP4 955 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 SEMA4DQ92854 862 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 DUSP16Q9BY84 665 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 NMUR1Q9HB89 426 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 POLMQ9NP87 494 aaPredicted RBP22.87■■□□□ 1.25
CBWD3-207ENST00000611426 RAB20Q9NX57 234 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 LSM7Q9UK45 103 aaKnown RBP22.87■■□□□ 1.25
CBWD3-207ENST00000611426 ZKSCAN5Q9Y2L8 839 aa22.87■■□□□ 1.25
CBWD3-207ENST00000611426 ITIH6Q6UXX5 1313 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 A0A1W2PQH9 124 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 LGALS16A8MUM7 142 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 GNA14O95837 355 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 HNRNPLP14866 589 aaKnown RBP eCLIP22.86■■□□□ 1.25
CBWD3-207ENST00000611426 KIF11P52732 1056 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 LIMK1P53667 647 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 HSP90AA4PQ58FG1 418 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 PPM1JQ5JR12 505 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 ZSCAN30Q86W11 494 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 TTC39CQ8N584 583 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 FAXDC2Q96IV6 333 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 ZDHHC4Q9NPG8 344 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 RXFP3Q9NSD7 469 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 CISHQ9NSE2 258 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 NUDT5Q9UKK9 219 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 ABCA7Q8IZY2 2146 aa22.86■■□□□ 1.25
CBWD3-207ENST00000611426 GREM1O60565 184 aa22.85■■□□□ 1.25
CBWD3-207ENST00000611426 TBX2Q13207 712 aaPredicted RBP22.85■■□□□ 1.25
CBWD3-207ENST00000611426 CCDC186Q7Z3E2 898 aa22.85■■□□□ 1.25
CBWD3-207ENST00000611426 DDX1Q92499 740 aaKnown RBP22.85■■□□□ 1.25
CBWD3-207ENST00000611426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.85■■□□□ 1.25
CBWD3-207ENST00000611426 DNMT3LQ9UJW3 386 aa22.85■■□□□ 1.25
CBWD3-207ENST00000611426 NAGPAQ9UK23 515 aa22.85■■□□□ 1.25
CBWD3-207ENST00000611426 LAMA1P25391 3075 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 A0A1W2PQC6 194 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 BCLAF3A2AJT9 711 aaKnown RBP22.84■■□□□ 1.25
CBWD3-207ENST00000611426 CHRM1P11229 460 aaPredicted RBP22.84■■□□□ 1.25
CBWD3-207ENST00000611426 PLA2G4AP47712 749 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 PSEN1P49768 467 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 C10orf120Q5SQS8 335 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 TCERG1LQ5VWI1 586 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 SPECC1LQ69YQ0 1117 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 KLHDC10Q6PID8 442 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 TMC6Q7Z403 805 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 TADA2BQ86TJ2 420 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 KCNV2Q8TDN2 545 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 TMEM176AQ96HP8 235 aa22.84■■□□□ 1.25
CBWD3-207ENST00000611426 BCCIPQ9P287 314 aaKnown RBP eCLIP22.84■■□□□ 1.25
CBWD3-207ENST00000611426 MYO18AQ92614 2054 aaKnown RBP22.84■■□□□ 1.25
CBWD3-207ENST00000611426 THADAQ6YHU6 1953 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 NEDD8-MDP1E9PL57 170 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 MDM4O15151 490 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 ADAM23O75077 832 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 DCAF17Q5H9S7 520 aaPredicted RBP22.83■■□□□ 1.25
CBWD3-207ENST00000611426 C10orf76Q5T2E6 689 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 STPG1Q5TH74 334 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 PMS2CLQ68D20 193 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TPGS1Q6ZTW0 290 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TRMT11Q7Z4G4 463 aaKnown RBP22.83■■□□□ 1.25
CBWD3-207ENST00000611426 SCD5Q86SK9 330 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 PGBD3Q8N328 593 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 ZNF513Q8N8E2 541 aaPredicted RBP22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TERB1Q8NA31 727 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 SLC4A11Q8NBS3 891 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 OLIG1Q8TAK6 271 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TATDN2Q93075 761 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 XPO6Q96QU8 1125 aaKnown RBP22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TUBGCP2Q9BSJ2 902 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 BBS2Q9BXC9 721 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 DNAJC17Q9NVM6 304 aaKnown RBP22.83■■□□□ 1.25
CBWD3-207ENST00000611426 WDR35Q9P2L0 1181 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 USP3Q9Y6I4 520 aa22.83■■□□□ 1.25
CBWD3-207ENST00000611426 TRIM24O15164 1050 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 RALAP11233 206 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 TYRP14679 529 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 BCKDHBP21953 392 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 KCNA4P22459 653 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 RAD23BP54727 409 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 GRAMD4Q6IC98 578 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 TCEAL6Q6IPX3 200 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 HMGB4Q8WW32 186 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 TCEAL3Q969E4 200 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 ARID3AQ99856 593 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 TAB2Q9NYJ8 693 aa22.82■■□□□ 1.24
CBWD3-207ENST00000611426 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.82■■□□□ 1.24
CBWD3-207ENST00000611426 TCRBV21S2A2A0A5A6 115 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 ESPNB1AK53 854 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 SLC16A3O15427 465 aaKnown RBP22.81■■□□□ 1.24
CBWD3-207ENST00000611426 TEX33O43247 280 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 MAP3K13O43283 966 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 ADRB1P08588 477 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CBWD6Q4V339 395 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CBWD3Q5JTY5 395 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 MIIPQ5JXC2 388 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CBWD5Q5RIA9 395 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 MIB1Q86YT6 1006 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 ZNF276Q8N554 614 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 RLN3Q8WXF3 142 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CDK5RAP1Q96SZ6 601 aaKnown RBP22.81■■□□□ 1.24
CBWD3-207ENST00000611426 UBXN6Q9BZV1 441 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 KCNF1Q9H3M0 494 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms