RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 H2AFY2Q9P0M6 372 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 GGA2Q9UJY4 613 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ZBTB7AO95365 584 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ZRANB3Q5FWF4 1079 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 IGDCC4Q8TDY8 1250 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TIPINQ9BVW5 301 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 MAP2K7O14733 419 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RHOBTB3O94955 611 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CYP51A1Q16850 503 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 YAF2Q8IY57 180 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 HPDLQ96IR7 371 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 SNX8Q9Y5X2 465 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TULP4Q9NRJ4 1543 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 PMPCBO75439 489 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ITGAXP20702 1163 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ATF7IP2Q5U623 682 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GET4Q7L5D6 327 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ZSWIM2Q8NEG5 633 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NSUN4Q96CB9 384 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 MAGED4Q96JG8 741 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GPR63Q9BZJ6 419 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CDC42EP4Q9H3Q1 356 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 C8orf4Q9NR00 106 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 PLCL2Q9UPR0 1127 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ASB14A6NK59 587 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CCRL2O00421 344 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF806P0C7X5 589 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 KLRC1P26715 233 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 KCNT1Q5JUK3 1230 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 FAXCQ5TGI0 409 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 BBS7Q8IWZ6 715 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ANKRD49Q8WVL7 239 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 HDAC2Q92769 488 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ILKAPQ9H0C8 392 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CAPN10Q9HC96 672 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TMEM8AQ9HCN3 771 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 KIAA0391O15091 583 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 SYNCRIPO60506 623 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TADA2AO75478 443 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GRK3P35626 688 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RPL5P46777 297 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GALNT18Q6P9A2 607 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ELP3Q9H9T3 547 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TNS3Q68CZ2 1445 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NCALDP61601 193 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF846Q147U1 533 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RSPH1Q8WYR4 309 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NCF1BA6NI72 391 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NCF1CA8MVU1 366 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NDUFB10O96000 172 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CYBBP04839 570 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 NCF1P14598 390 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 AMHR2Q16671 573 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GJB7Q6PEY0 223 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 LRRC71Q8N4P6 559 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 EPB41L1Q9H4G0 881 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 SPASTQ9UBP0 616 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 COQ6Q9Y2Z9 468 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ICE1Q9Y2F5 2266 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 INPP4BO15327 924 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RPS6KA5O75582 802 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 PTPN7P35236 360 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RGS4P49798 205 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ARHGEF7Q14155 803 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 USP49Q70CQ1 688 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 PAFAH2Q99487 392 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF221Q9UK13 617 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ALDH6A1Q02252 535 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 MADCAM1Q13477 382 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 CCNIQ14094 377 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 EPHA7Q15375 998 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 LSM14AQ8ND56 463 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 UTP15Q8TED0 518 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 RNFT2Q96EX2 444 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TEX13BQ9BXU2 312 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 TIMMDC1Q9NPL8 285 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ASCC3Q8N3C0 2202 aaKnown RBP8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GTF2H1P32780 548 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 GLRBP48167 497 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 ITGA7Q13683 1181 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 DDR2Q16832 855 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 FAM45AQ8TCE6 357 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 KRT84Q9NSB2 600 aa8.93□□□□□ -0.98
CSMD1-216ENST00000602557 LRRIQ1Q96JM4 1722 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PSMD3O43242 534 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 NCAM1P13591 858 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 GPD1P21695 349 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 QPRTQ15274 297 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 FIG4Q92562 907 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 FOXP3Q9BZS1 431 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SENP2Q9HC62 589 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 RP1P56715 2156 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 EXTL3O43909 919 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 NOS1APO75052 506 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CYP19A1P11511 503 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms