RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IGHV1OR15-9A0A0B4J2B8 117 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 FAM237AA0A1B0GTK4 181 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 TIMM44O43615 452 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 HYAL3O43820 417 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 OPHN1O60890 802 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 NDUFS2O75306 463 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 CILPO75339 1184 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 CFIP05156 583 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 CISD3P0C7P0 127 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 GNSP15586 552 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 PFKFB1P16118 471 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 SYKP43405 635 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 STARD3Q14849 445 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 WDR45BQ5MNZ6 344 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 C1orf220Q5T0J3 134 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 KRT39Q6A163 491 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 Q6ZNB5 142 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 TPGS1Q6ZTW0 290 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 PIP4P1Q86T03 277 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 WBP2Q969T9 261 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 ZDHHC5Q9C0B5 715 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 TMEM8AQ9HCN3 771 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 CD248Q9HCU0 757 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 NAGPAQ9UK23 515 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 PCNX2A6NKB5 2137 aa18.74■□□□□ 0.59
SHKBP1-227ENST00000602011 A0A1B0GVL5 298 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 SPAARA0A1B0GVQ0 90 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 A0A1W2PQH9 124 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 ARHGAP33O14559 1287 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 PGFP49763 221 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 KRT85P78386 507 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 ADAM9Q13443 819 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 EGFLAMQ63HQ2 1017 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 SPOPLQ6IQ16 392 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 FAM186BQ8IYM0 893 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 ERLEC1Q96DZ1 483 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 SPATA32Q96LK8 384 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 SLC2A11Q9BYW1 496 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 NMUR1Q9HB89 426 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 OSER1Q9NX31 292 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 HMGXB4Q9UGU5 601 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 HCN2Q9UL51 889 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 STRIP2Q9ULQ0 834 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 NEUROG3Q9Y4Z2 214 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 PKD1L2Q7Z442 2459 aa18.73■□□□□ 0.59
SHKBP1-227ENST00000602011 TNRC6BQ9UPQ9 1833 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 PRRT4C9JH25 899 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 CYP26A1O43174 497 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 CYBBP04839 570 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 NDUFV2P19404 249 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 OXTRP30559 389 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 PI4KAP42356 2102 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 GCLMP48507 274 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 ORC1Q13415 861 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 EIF4HQ15056 248 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 EDRF1Q3B7T1 1238 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 MIB1Q86YT6 1006 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 TAS1R2Q8TE23 839 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 DNAAF2Q9NVR5 837 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 ADAMTS9Q9P2N4 1935 aa18.72■□□□□ 0.59
SHKBP1-227ENST00000602011 SRRM3A6NNA2 597 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 TRIM24O15164 1050 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 STC2O76061 302 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 PENKP01210 267 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 WASP42768 502 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 ZNF445P59923 1031 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 CPXM2Q8N436 756 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 TRIML1Q8N9V2 468 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 CADM4Q8NFZ8 388 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 OR2I1PQ8NGU4 316 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 ZCCHC14Q8WYQ9 949 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 MRGPRX1Q96LB2 322 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 TWNKQ96RR1 684 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 SCAND2PQ9GZW5 306 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 APOBEC3GQ9HC16 384 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 THAP10Q9P2Z0 257 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 KLK13Q9UKR3 277 aa18.71■□□□□ 0.59
SHKBP1-227ENST00000602011 PLXND1Q9Y4D7 1925 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 CD6P30203 668 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 PPP3CAQ08209 521 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 DPYDQ12882 1025 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ENPP2Q13822 863 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ZNF423Q2M1K9 1284 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 PPP1R26Q5T8A7 1209 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ARHGAP17Q68EM7 881 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 SCD5Q86SK9 330 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ANKRD52Q8NB46 1076 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 FBXL13Q8NEE6 735 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ELMO3Q96BJ8 720 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 TMEM176AQ96HP8 235 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ACOX2Q99424 681 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 GTPBP2Q9BX10 602 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 ITM2CQ9NQX7 267 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 OLA1Q9NTK5 396 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 CYP8B1Q9UNU6 501 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 MSRB2Q9Y3D2 182 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms