RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	SOX5	P35711	763 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	STAT1	P42224	750 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	HARS2	P49590	506 aa	Known RBP	21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TMEM25	Q86YD3	366 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	DDX1	Q92499	740 aa	Known RBP	21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CPXM1	Q96SM3	734 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PNKP	Q96T60	521 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CBX8	Q9HC52	389 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NLRC4	Q9NPP4	1024 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PRMT8	Q9NR22	394 aa	Predicted RBP	21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ASNSD1	Q9NWL6	643 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SFMBT1	Q9UHJ3	866 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CACNA1H	O95180	2353 aa		21.2	■□□□□ 0.98
GTPBP3-223	ENST00000600995	FANCM	Q8IYD8	2048 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ATG2B	Q96BY7	2078 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CHURC1-FNTB	B4DL54	471 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	EPHB6	O15197	1021 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PAPSS2	O95340	614 aa	Predicted RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	LSM8	O95777	96 aa	Known RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	LATS1	O95835	1130 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	EGF	P01133	1207 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	FYN	P06241	537 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	HMBS	P08397	361 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SP9	P0CG40	484 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NCAM1	P13591	858 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CORO1A	P31146	461 aa	Known RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CXCL12	P48061	93 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	YWHAZ	P63104	245 aa	Known RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	RING1	Q06587	406 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NNT	Q13423	1086 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	GAS6	Q14393	721 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ANO4	Q32M45	955 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	EFHC1	Q5JVL4	640 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ZDHHC17	Q8IUH5	632 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PASD1	Q8IV76	773 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CPXM2	Q8N436	756 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	C1orf131	Q8NDD1	294 aa	Known RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	EPS8L1	Q8TE68	723 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	FAM149B1	Q96BN6	582 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	FAM126A	Q9BYI3	521 aa	Predicted RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	POPDC2	Q9HBU9	364 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	AGO1	Q9UL18	857 aa	Known RBP	21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	KIAA1549L	Q6ZVL6	1849 aa		21.19	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CAPN9	O14815	690 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	GFPT2	O94808	682 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NUDT18	Q6ZVK8	323 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NOP9	Q86U38	636 aa	Known RBP	21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	DENND1C	Q8IV53	801 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	UNC45B	Q8IWX7	931 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ETFBKMT	Q8IXQ9	262 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	FAM217A	Q8IXS0	508 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	IPO4	Q8TEX9	1081 aa	Known RBP	21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	AZIN2	Q96A70	460 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	XPO6	Q96QU8	1125 aa	Known RBP	21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995	STOML2	Q9UJZ1	356 aa		21.18	■□□□□ 0.98
GTPBP3-223	ENST00000600995		A0A1B0GTH6	734 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995		A0A1W2PQC6	194 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TEX33	O43247	280 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	IGLV3-27	P01718	113 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	APOD	P05090	189 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NBL1	P41271	181 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	GRIA2	P42262	883 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SLC6A11	P48066	632 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NRL	P54845	237 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ZNF445	P59923	1031 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CSTF1	Q05048	431 aa	Known RBP	21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NUGGC	Q68CJ6	796 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NAIF1	Q69YI7	327 aa	Predicted RBP	21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995		Q6ZS52	159 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SERPINB11	Q96P15	392 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	BBS2	Q9BXC9	721 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	IRX2	Q9BZI1	471 aa	Predicted RBP	21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SYNC	Q9H7C4	482 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	DEC1	Q9P2X7	70 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	MYO6	Q9UM54	1294 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NAALADL1	Q9UQQ1	740 aa		21.17	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PROB1	E7EW31	1015 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	GOLGA6L19	H0YKK7	550 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CACNG3	O60359	315 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	HSF2BP	O75031	334 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	RNF40	O75150	1001 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	KAT7	O95251	611 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	SERPINC1	P01008	464 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CCDC172	P0C7W6	258 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TYR	P14679	529 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TNFRSF4	P43489	277 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	GABRB2	P47870	512 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CDR2	Q01850	454 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	PTPN20	Q4JDL3	420 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ZC3H14	Q6PJT7	736 aa	Known RBP	21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TPGS1	Q6ZTW0	290 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	TOGARAM2	Q6ZUX3	1019 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	CACNA2D4	Q7Z3S7	1137 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	LUZP1	Q86V48	1076 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	C12orf40	Q86WS4	652 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	MSANTD4	Q8NCY6	345 aa		21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	ZNF397	Q8NF99	534 aa	Predicted RBP	21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	DQX1	Q8TE96	717 aa	Known RBP	21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	EZH1	Q92800	747 aa	Predicted RBP	21.16	■□□□□ 0.98
GTPBP3-223	ENST00000600995	NELL1	Q92832	810 aa		21.16	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms