RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IL4RP24394 825 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC8A1P32418 973 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 GRB14Q14449 540 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ITIH4Q14624 930 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 CGB2Q6NT52 195 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 OSTM1Q86WC4 334 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 LINC01465Q8N7H1 131 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SERAC1Q96JX3 654 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KCTD15Q96SI1 283 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 MAF1Q9H063 256 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 UBP1Q9NZI7 540 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 PAK5Q9P286 719 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 NUDT5Q9UKK9 219 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 M0QZ92 97 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 COPEO14579 308 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 CBX6O95503 412 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ASMTLO95671 621 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ABHD2P08910 425 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 CYP4V2Q6ZWL3 525 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KDELC2Q7Z4H8 507 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZNF75CPQ92670 426 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 LRRC37BQ96QE4 947 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 MYADML2A6NDP7 307 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 PDHA1P08559 390 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 GMPRP36959 345 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 MGAT5Q09328 741 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 KYAT1Q16773 422 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 FYB2Q5VWT5 728 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 SYPL2Q5VXT5 272 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 B3GALNT2Q8NCR0 500 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 MYLK2Q9H1R3 596 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 ACSS3Q9H6R3 686 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 DDX43Q9NXZ2 648 aaKnown RBP11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 CITO14578 2027 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 IQANK1A0A1B0GTG1 560 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 MYCP01106 439 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 USP17L7P0C7H9 530 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 NCAM1P13591 858 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 GABRB2P47870 512 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 TKTL1P51854 596 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 LILRA4P59901 499 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 YWHAZP63104 245 aaKnown RBP11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 MTFR1Q15390 333 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZCCHC23Q6ZST2 131 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 HACE1Q8IYU2 909 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 KBTBD7Q8WVZ9 684 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 CSPG4P5Q96PW8 444 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 KIAA1257Q9ULG3 409 aa11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 SMG5Q9UPR3 1016 aaKnown RBP11.94□□□□□ -0.5
ARHGEF1-220ENST00000600274 AP1G2O75843 785 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANP32DO95626 131 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SRGAP2BP0DMP2 458 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 ALDH3A1P30838 453 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SCNN1GP51170 649 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SNX16P57768 344 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 DEUP1Q05D60 604 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 CACNB2Q08289 660 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 NR1H3Q13133 447 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 RIBC1Q8N443 379 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZNF395Q9H8N7 513 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 WDR27A2RRH5 827 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 CFAP69A5D8W1 941 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 NCALDP61601 193 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 PDK2Q15119 407 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 STILQ15468 1287 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 EFHC2Q5JST6 749 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 RFX8Q6ZV50 586 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 OTOAQ7RTW8 1153 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 USP6NLQ92738 828 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 PTPRN2Q92932 1015 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 ULBP1Q9BZM6 244 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 USP29Q9HBJ7 922 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 KLHL8Q9P2G9 620 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC24A2Q9UI40 661 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 NOD1Q9Y239 953 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 GOLGA8TH3BQL2 631 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms