RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 IFNKQ9P0W0 207 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 AGO1Q9UL18 857 aaKnown RBP15.89■□□□□ 0.13
LIG1-219ENST00000600055 ADH1CP00326 375 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 EGFP01133 1207 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 PBX1P40424 430 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 RPS9P46781 194 aaKnown RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 YWHAZP63104 245 aaKnown RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 NOMO3P69849 1222 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 PITX1P78337 314 aaPredicted RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 AMPD2Q01433 879 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 MESP2Q0VG99 397 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 CCINQ13939 588 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 GAS6Q14393 721 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 TRIP4Q15650 581 aaPredicted RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 ANO4Q32M45 955 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 OLFML1Q6UWY5 402 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 Q6ZS52 159 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 TPGS1Q6ZTW0 290 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 ZNF677Q86XU0 584 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 NAT16Q8N8M0 369 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 IPO4Q8TEX9 1081 aaKnown RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 EZH1Q92800 747 aaPredicted RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 CD101Q93033 1021 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 PLD4Q96BZ4 506 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 P2RY11Q96G91 374 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 SYNCQ9H7C4 482 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 POPDC2Q9HBU9 364 aa15.88■□□□□ 0.13
LIG1-219ENST00000600055 HBS1LQ9Y450 684 aaKnown RBP15.88■□□□□ 0.13
LIG1-219ENST00000600055 ZDBF2Q9HCK1 2354 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 ZNF318Q5VUA4 2279 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 ANTXRLA6NF34 631 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 LRRC53A6NM62 1247 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 CAPN9O14815 690 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 LSM8O95777 96 aaKnown RBP15.87■□□□□ 0.13
LIG1-219ENST00000600055 CYP1A1P04798 512 aaPredicted RBP15.87■□□□□ 0.13
LIG1-219ENST00000600055 SLC6A3Q01959 620 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 GAD2Q05329 585 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 GRSF1Q12849 480 aaKnown RBP eCLIP15.87■□□□□ 0.13
LIG1-219ENST00000600055 MTAPQ13126 283 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 TAC4Q86UU9 113 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 ERICH1Q86X53 443 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 SFTPA1Q8IWL2 248 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 DEFB106AQ8N104 65 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 SLC30A5Q8TAD4 765 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 BHMTQ93088 406 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 TTYH3Q9C0H2 523 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 CHRDQ9H2X0 955 aa15.87■□□□□ 0.13
LIG1-219ENST00000600055 SPATA6Q9NWH7 488 aaPredicted RBP15.87■□□□□ 0.13
LIG1-219ENST00000600055 H0Y858 1186 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 IGLV3-27P01718 113 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 GABRB2P47870 512 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 NUBP1P53384 320 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 TBX4P57082 545 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 ZNF445P59923 1031 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 LRRC32Q14392 662 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 ANGPT1Q15389 498 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 DCAF6Q58WW2 860 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 EFHC1Q5JVL4 640 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 DGKKQ5KSL6 1271 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 E4F1Q66K89 784 aaPredicted RBP15.86■□□□□ 0.13
LIG1-219ENST00000600055 BEND5Q7L4P6 421 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 IRF2BP2Q7Z5L9 587 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 XYLT1Q86Y38 959 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 C18orf8Q96DM3 657 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 SLC2A13Q96QE2 648 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 AGPAT1Q99943 283 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 XPO4Q9C0E2 1151 aaKnown RBP15.86■□□□□ 0.13
LIG1-219ENST00000600055 ASNSD1Q9NWL6 643 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 ZNF510Q9Y2H8 683 aa15.86■□□□□ 0.13
LIG1-219ENST00000600055 F5P12259 2224 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 NEDD8-MDP1E9PL57 170 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 TRIM24O15164 1050 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 HOXC11O43248 304 aaPredicted RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 HSF2BPO75031 334 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 GLI1P08151 1106 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 UNGP13051 313 aaPredicted RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 TYRP14679 529 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 FERP16591 822 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 DRD1P21728 446 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 MAGEA9P43362 315 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 HARS2P49590 506 aaKnown RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 SNX16P57768 344 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 RNASE9P60153 205 aaKnown RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 KDSRQ06136 332 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 PKN3Q6P5Z2 889 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 MMS22LQ6ZRQ5 1243 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 TOGARAM2Q6ZUX3 1019 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 SLC26A9Q7LBE3 791 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 ETFBKMTQ8IXQ9 262 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 MAML2Q8IZL2 1156 aaPredicted RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 FCRL2Q96LA5 508 aaPredicted RBP15.85■□□□□ 0.13
LIG1-219ENST00000600055 PRRX2Q99811 253 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 TRIM62Q9BVG3 475 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 BBS2Q9BXC9 721 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 KCNH6Q9H252 994 aa15.85■□□□□ 0.13
LIG1-219ENST00000600055 SEPT11Q9NVA2 429 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms