RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 GABRB2P47870 512 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 ZNF445P59923 1031 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 ARID5AQ03989 594 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 TRIP4Q15650 581 aaPredicted RBP15.69■□□□□ 0.1
UPF1-202ENST00000594243 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 LY6G5CQ5SRR4 150 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 OR6B2Q6IFH4 312 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 TRIM72Q6ZMU5 477 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 Q6ZNB5 142 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 TOGARAM2Q6ZUX3 1019 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 C18orf8Q96DM3 657 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 IER2Q9BTL4 223 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 IRF2BPLQ9H1B7 796 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 NAALADL1Q9UQQ1 740 aa15.69■□□□□ 0.1
UPF1-202ENST00000594243 KMT2EQ8IZD2 1858 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 COL4A3Q01955 1670 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 HSF2BPO75031 334 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 KLKB1P03952 638 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 ERBB2P04626 1255 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 CYP1A1P04798 512 aaPredicted RBP15.68■□□□□ 0.1
UPF1-202ENST00000594243 FYNP06241 537 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 ADH5P11766 374 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 CORO1AP31146 461 aaKnown RBP15.68■□□□□ 0.1
UPF1-202ENST00000594243 EIF2DP41214 584 aaKnown RBP15.68■□□□□ 0.1
UPF1-202ENST00000594243 SLC6A3Q01959 620 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 ANO4Q32M45 955 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 PREPLQ4J6C6 727 aaPredicted RBP15.68■□□□□ 0.1
UPF1-202ENST00000594243 PTPN20Q4JDL3 420 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 FIGNQ5HY92 759 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 FAM183BPQ6ZVS7 135 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 DENND1CQ8IV53 801 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 UNC45BQ8IWX7 931 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 SLC20A1Q8WUM9 679 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 IQCDQ96DY2 449 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 CHFRQ96EP1 664 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 SERPINB11Q96P15 392 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 IFNKQ9P0W0 207 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 WDR35Q9P2L0 1181 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 TJP2Q9UDY2 1190 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 AGO1Q9UL18 857 aaKnown RBP15.68■□□□□ 0.1
UPF1-202ENST00000594243 ZNF318Q5VUA4 2279 aa15.68■□□□□ 0.1
UPF1-202ENST00000594243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
UPF1-202ENST00000594243 HOXC11O43248 304 aaPredicted RBP15.67■□□□□ 0.1
UPF1-202ENST00000594243 CBFA2T2O43439 604 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 LATS1O95835 1130 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 CHRNB2P17787 502 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 TBX4P57082 545 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 NOMO3P69849 1222 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 FMO1Q01740 532 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 RING1Q06587 406 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 NNTQ13423 1086 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 CCINQ13939 588 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 FBXO43Q4G163 708 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 DCAF6Q58WW2 860 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 SYPL2Q5VXT5 272 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 OLFML1Q6UWY5 402 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 IRF2BP2Q7Z5L9 587 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 TMEM25Q86YD3 366 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 C1orf210Q8IVY1 113 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
UPF1-202ENST00000594243 CCDC26Q8TAB7 109 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 CPA5Q8WXQ8 436 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 BAP1Q92560 729 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 PNKPQ96T60 521 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 AGPAT1Q99943 283 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 TLR6Q9Y2C9 796 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 WDFY4Q6ZS81 3184 aa15.67■□□□□ 0.1
UPF1-202ENST00000594243 LRRC53A6NM62 1247 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 MSI1O43347 362 aaKnown RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 GBP1P32455 592 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 SCNN1AP37088 669 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 PBX1P40424 430 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 OPRD1P41143 372 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 PTPN5P54829 565 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 CDK17Q00537 523 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 TAF5Q15542 800 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 GAB4Q2WGN9 574 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 SFMBT2Q5VUG0 894 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 NAA35Q5VZE5 725 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 FSTL4Q6MZW2 842 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 MAMSTRQ6ZN01 415 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 TPGS1Q6ZTW0 290 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 NUDT18Q6ZVK8 323 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 SLC26A9Q7LBE3 791 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 DEFB106AQ8N104 65 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 CPXM2Q8N436 756 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 RNF214Q8ND24 703 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 DQX1Q8TE96 717 aaKnown RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 AZIN2Q96A70 460 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 SLC2A13Q96QE2 648 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 XPO6Q96QU8 1125 aaKnown RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 BBS2Q9BXC9 721 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 NUCKS1Q9H1E3 243 aaKnown RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 CHRDQ9H2X0 955 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 FBRSL1Q9HCM7 1045 aaKnown RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 SPATA6Q9NWH7 488 aaPredicted RBP15.66■□□□□ 0.1
UPF1-202ENST00000594243 AIPL1Q9NZN9 384 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 MARK1Q9P0L2 795 aa15.66■□□□□ 0.1
UPF1-202ENST00000594243 A0A1W2PQJ5 194 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms