RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 ANKLE1Q8NAG6 615 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 LRRN4Q8WUT4 740 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 C10orf82Q8WW14 230 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 LENG1Q96BZ8 264 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 SERAC1Q96JX3 654 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 MYLK2Q9H1R3 596 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 GOLGA2P5Q9HBQ8 144 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 GTF2IRD1Q9UHL9 959 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 IPPQ9Y573 584 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 ATP5HO75947 161 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 TROVE2P10155 538 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 ARL4AP40617 200 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 MATKP42679 507 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 SULT1E1P49888 294 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 NEK3P51956 506 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 CRYBB1P53674 252 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 HEATR6Q6AI08 1181 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 PRPF39Q86UA1 669 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 LRRC6Q86X45 466 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 PPM1NQ8N819 430 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 B3GALNT2Q8NCR0 500 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 ZNF180Q9UJW8 692 aa17.17■□□□□ 0.34
PRKCSH-217ENST00000592741 DAB1O75553 588 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 KRT37O76014 449 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 UNC5CO95185 931 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 ZNF865P0CJ78 1059 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 PRKCHP24723 683 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 TKTP29401 623 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 GTF2A1P52655 376 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 RIPK1Q13546 671 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 NCBP2-AS2Q69YL0 99 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 BZW1Q7L1Q6 419 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 ASRGL1Q7L266 308 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 OSTM1Q86WC4 334 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 FAM149B1Q96BN6 582 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 ERP27Q96DN0 273 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 HNRNPABQ99729 332 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 MANSC1Q9H8J5 431 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 PRDM16Q9HAZ2 1276 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 ARHGEF3Q9NR81 526 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 BAIAP2L1Q9UHR4 511 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 CPA4Q9UI42 421 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 CHKBQ9Y259 395 aa17.16■□□□□ 0.34
PRKCSH-217ENST00000592741 C17orf102A2RUQ5 167 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 METTL18O95568 372 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 APOEP02649 317 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 C1QAP02745 245 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 PYGBP11216 843 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC8A1P32418 973 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 MAGEA3P43357 314 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 LILRA4P59901 499 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 ADIGQ0VDE8 80 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 SLC25A52Q3SY17 297 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 PIGZQ86VD9 579 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 CHSY1Q86X52 802 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 PSTKQ8IV42 348 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 DEFB106AQ8N104 65 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 ZNF398Q8TD17 642 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 TFB1MQ8WVM0 346 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 KATNAL1Q9BW62 490 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 DUSP16Q9BY84 665 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 AP5M1Q9H0R1 490 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 XAB2Q9HCS7 855 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 FZD10Q9ULW2 581 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 TRIM49D1C9J1S8 452 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 SNRPAP09012 282 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 DHRS4L1P0CG22 281 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 GOT1P17174 413 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 AMPD1P23109 780 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 FAM131BQ86XD5 332 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 NME8Q8N427 588 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 KIF2BQ8N4N8 673 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 ZNF276Q8N554 614 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 SMG8Q8ND04 991 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 APBB2Q92870 758 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 MAGEB5Q9BZ81 275 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 IQCGQ9H095 443 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 C12orf65Q9H3J6 166 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 DTLQ9NZJ0 730 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 FLRT1Q9NZU1 646 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 USP3Q9Y6I4 520 aa17.15■□□□□ 0.34
PRKCSH-217ENST00000592741 LRPAP1P30533 357 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 UNC5AQ6ZN44 842 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 ZNF534Q76KX8 674 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 ARRDC4Q8NCT1 418 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 GSDMBQ8TAX9 411 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 NPHS2Q9NP85 383 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 C2CD2LO14523 706 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms